Pairwise Alignments

Query, 308 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  196 bits (498), Expect = 6e-55
 Identities = 111/299 (37%), Positives = 174/299 (58%), Gaps = 5/299 (1%)

Query: 10  LLGLASLTLQGPSAWAAEPLTLTVGDQFFSNRIVLELSGELKDLPYTIDFKRFNTGSPVA 69
           LL +A   L    A A+E LTL +GDQ  + R  LE +  L+DLPY I +  F   +P+A
Sbjct: 7   LLTVAVALLLAGHASASERLTLRIGDQKGNMRAQLEAADALRDLPYDIRWAEFPAAAPLA 66

Query: 70  SAVASGALDVGIVGDTPVISLAANGAPVKVVASTQTSLDGVGIVAR--KGIHSVADLKGK 127
            A+ +GA+D GI+GD P++ + A+GAPVK +A  ++   G  ++ R    + S A+LKGK
Sbjct: 67  EALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSAAELKGK 126

Query: 128 TVAIWNGSWSQQLAYKALDEAGVPRSSVHFKYLLPAEASLALTQGDIDAFGTWEPYVSLQ 187
            +A   GS    LA KAL +AG+    V F++L P +A +AL  G +DA+ TWEPY +L 
Sbjct: 127 RIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWEPYTALA 186

Query: 188 EKEGSS-LIRNAKGLMSAPTYIVAYEPALAQ--KSAIIKDFIARLTRAREWSNTHIDEYA 244
           E  G   ++ N +GL +  +++ A + AL +  + A ++D++ RL  A+ W+N H+D Y+
Sbjct: 187 ELSGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQVWANQHLDTYS 246

Query: 245 EAWSKANQSAPEIAKVWFKRDAIKVLPISPTIVSEAQATADFLVDAQMLKQRYDVAPLF 303
           +  +       E A++ F+R  ++   I    V+E Q TADF     ++ +R DVAP F
Sbjct: 247 KTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMTERLDVAPTF 305