Pairwise Alignments

Query, 308 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 319 a.a., aliphatic sulfonate ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score =  108 bits (271), Expect = 1e-28
 Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 8/299 (2%)

Query: 8   LSLLGLASLTLQGPSAWAAEPLTLTVGDQFFSNRIVLELSGELKDLPYT---IDFKRFNT 64
           L+L+GL S++    +A  + P  L +G Q  S  +VL  S +L +  Y    I +  F  
Sbjct: 7   LALVGLLSVSTIAVAA-ESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPQSKISWVEFPA 65

Query: 65  GSPVASAVASGALDVGIVGDTPVISLAANGAPVKVVA--STQTSLDGVGIVARKGIHSVA 122
           G  +  A+  G++D+G  GD P I   A GA +  V     +   + + +     I +VA
Sbjct: 66  GPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVA 125

Query: 123 DLKGKTVAIWNGSWSQQLAYKALDEAGVPRSSVHFKYLLPAEASLALTQGDIDAFGTWEP 182
           DLKG  VA   GS S  L  +AL +AG+  + +   YL PA+A  A  QG++DA+  W+P
Sbjct: 126 DLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDP 185

Query: 183 YVSLQEKEGS-SLIRNAKGLMSAPTYIVAYEPALAQKSAIIKDFIARLTRAREWSNTHID 241
           Y S    +G   ++++   L    ++ +A  P   +  A I+  +A  + A   + +  +
Sbjct: 186 YYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQRE 245

Query: 242 EYAEAWSKA-NQSAPEIAKVWFKRDAIKVLPISPTIVSEAQATADFLVDAQMLKQRYDV 299
           +     +K     AP IA     R    + P++  + +  Q TAD   + +++ ++ D+
Sbjct: 246 QSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDI 304