Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens SBW25

Subject, 671 a.a., excinuclease UvrABC protein B from Pseudomonas putida KT2440

 Score = 1196 bits (3094), Expect = 0.0
 Identities = 602/670 (89%), Positives = 637/670 (95%)

Query: 1   MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL 60
           MS+FQLVTRF+PAGDQPEAIRQ+VEGIEAGL+HQTLLGVTGSGKTFSIANVI Q+ RPTL
Sbjct: 1   MSEFQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTL 60

Query: 61  VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ 120
           VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
Sbjct: 61  VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ 120

Query: 121 MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQY 180
           MRLSATKALLER+DAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQR LLRRL  LQY
Sbjct: 121 MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY 180

Query: 181 TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF 240
           TRN+MDFARATFRVRGDVIDI+PAESDLEAIRIELFDDEVE+++AFDPLTGEV RKLPRF
Sbjct: 181 TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRF 240

Query: 241 TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG 300
           TFYPKSHYVTPRETL+ A+EGIK EL ERLEYL   NKLVEAQRLEQRTRFDLEMILELG
Sbjct: 241 TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELG 300

Query: 301 YCNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL 360
           YCNGIENYSRYLSGR +GAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
Sbjct: 301 YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL 360

Query: 361 VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE 420
           VEYGFR+PSALDNRPMRFDEWE +SPQTIFVSATPG YEAEHAGRV+EQ+VRPTGLVDP+
Sbjct: 361 VEYGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ 420

Query: 421 IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT 480
           +E+RPALTQVDDLLSEI KRVA  ERVL TTLTKRM+EDL+DYLADH VRVRYLHSDIDT
Sbjct: 421 VEVRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDT 480

Query: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 540
           VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
Sbjct: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 540

Query: 541 ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATV 600
           ARNLNGRAILYAD +TGSM+RAI ET+RRR+KQIAFN  NGI PKGV KD+ DIMEGATV
Sbjct: 541 ARNLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATV 600

Query: 601 PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE 660
           PG+RSKKRKGMAKAAEESA+YE ELR+P EITKRI+QLEEKM Q ARDLEFEAAAQ RDE
Sbjct: 601 PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDE 660

Query: 661 IGKLRERLLA 670
           I +LRERL++
Sbjct: 661 IAQLRERLIS 670