Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens SBW25

Subject, 706 a.a., Excinuclease ABC subunit B from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  874 bits (2257), Expect = 0.0
 Identities = 438/667 (65%), Positives = 533/667 (79%), Gaps = 3/667 (0%)

Query: 2   SDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLV 61
           S F+L   + PAGDQPEAIRQ+VEG+  G   QTLLGVTGSGKTF++ANVIA++ RP +V
Sbjct: 33  SPFELFLPYPPAGDQPEAIRQLVEGVNDGEVFQTLLGVTGSGKTFTMANVIARLGRPAIV 92

Query: 62  LAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQM 121
            APNKTLAAQLY EF+ FFP NAVEYFVSYYDYYQPEAYVP  D FIEKD++IN+HIEQM
Sbjct: 93  FAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQM 152

Query: 122 RLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYT 181
           RLS TK++LER+D +IV TVS IYG+G PE+Y +MV+ +  GDK+ QR+L+ +L  +QY 
Sbjct: 153 RLSCTKSILERRDVVIVATVSAIYGIGKPESYHQMVMTLRTGDKIGQRDLIAQLVRMQYA 212

Query: 182 RNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFT 241
           RN+ DF+R  FRVRGD ID++PAE    AIRIELFDDEVE+L  FDPLTG+V +K+PRFT
Sbjct: 213 RNEQDFSRGKFRVRGDTIDVFPAEHSEMAIRIELFDDEVETLQLFDPLTGKVRQKIPRFT 272

Query: 242 FYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGY 301
            YP SHYVTPRE ++ A+E IK+ELA+RL+ L    KLVEAQRLEQRTRFD+EM+ E+G+
Sbjct: 273 VYPSSHYVTPREQVLHAVEAIKLELADRLKQLVGEGKLVEAQRLEQRTRFDVEMLSEVGH 332

Query: 302 CNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLV 361
           C GIENYSR+L+G   G PP TL DYLP DA++ +DESHV + Q G MY GDR+RK TLV
Sbjct: 333 CKGIENYSRHLAGSAPGEPPSTLTDYLPKDAVMFLDESHVLMGQFGGMYNGDRARKTTLV 392

Query: 362 EYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPEI 421
           EYGFRLPSALDNRP++ +E+E    Q +FVSATP +YE  HAG+V+EQLVRPTGLVDPE+
Sbjct: 393 EYGFRLPSALDNRPLKLEEFEQRMRQVVFVSATPADYEKTHAGQVVEQLVRPTGLVDPEL 452

Query: 422 EIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTV 481
           E+RPA  QVDD+L EI  RV   ERVL+TTLTKRM+E LTDYL ++GV+VRYLHSD+DTV
Sbjct: 453 EVRPATHQVDDVLQEIRIRVEKNERVLITTLTKRMAEQLTDYLTENGVKVRYLHSDVDTV 512

Query: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541
           ERVEIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLRSERSLIQTIGRAA
Sbjct: 513 ERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAA 572

Query: 542 RNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATVP 601
           RNL G+AILYADRIT SM+RA+ ETQRRRDKQIA NL  GI P+ + K + D+++G    
Sbjct: 573 RNLGGKAILYADRITDSMKRAMDETQRRRDKQIAHNLAMGIEPRSINKRIKDLIDGVY-- 630

Query: 602 GSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDEI 661
            S    R+    AAE + +   E  S  ++ + I++LE+ M + AR+LEFE AA  RD++
Sbjct: 631 -SEKAGREADRLAAESAQRASVEDMSEKDVAREIKRLEKLMLEHARNLEFEKAAGVRDQL 689

Query: 662 GKLRERL 668
             L+ ++
Sbjct: 690 AHLKAQV 696