Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens SBW25

Subject, 678 a.a., excinuclease ABC, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  721 bits (1861), Expect = 0.0
 Identities = 368/671 (54%), Positives = 497/671 (74%), Gaps = 6/671 (0%)

Query: 3   DFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVL 62
           DF++++ + P GDQP AI+ + EGI +G   Q LLGVTGSGKTF++ANVI ++ RPTLVL
Sbjct: 2   DFKIISDYSPTGDQPNAIKNLSEGISSGEPSQVLLGVTGSGKTFTVANVIQEVQRPTLVL 61

Query: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122
             NKTLAAQLYGEFK FFP+NAVEYF+SYYDYYQPEA++P+S  +IEKD SIN+ IE++R
Sbjct: 62  CHNKTLAAQLYGEFKQFFPDNAVEYFISYYDYYQPEAFIPTSGVYIEKDLSINEEIEKLR 121

Query: 123 LSATKALLE-RKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYT 181
           LSAT ALL  R+D I+V +VSCIYG+G+PE + K V++++ G ++ + +LL +L  + Y+
Sbjct: 122 LSATSALLSGRRDVIVVASVSCIYGIGNPEEFGKNVVNLEEGQRIPRNQLLFQLVDILYS 181

Query: 182 RNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFT 241
           R +++F   TFRV+GD +DI+ A +D  A RI  + DE+E +   DP TG+ I    + T
Sbjct: 182 RANVEFKHGTFRVKGDTVDIFVAYADF-AYRIYFWGDEIEGIQRIDPETGKRISSEKQIT 240

Query: 242 FYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGY 301
            +P + +VT +ET+  AI+ I+ +L  ++ +   + +L EA RL +RT FDLEMI ELGY
Sbjct: 241 IFPANLFVTGKETIDVAIKEIQDDLMSQISFFEKDMRLEEASRLRERTEFDLEMIRELGY 300

Query: 302 CNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLV 361
           C+G+ENYSRY   R +GA P  L DY P D +LVIDESHV+VPQ+ AM+ GDRSRK  LV
Sbjct: 301 CSGVENYSRYFDRRSAGARPFCLLDYFPDDYMLVIDESHVTVPQIRAMWGGDRSRKVNLV 360

Query: 362 EYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHA-GRVIEQLVRPTGLVDPE 420
           EYGFRLPSALDNRP++FDE+E+++ Q I+VSATP +YE     G V+EQ++RPTGL+DP 
Sbjct: 361 EYGFRLPSALDNRPLKFDEFESLTNQVIYVSATPADYELNQTDGVVVEQIIRPTGLLDPL 420

Query: 421 IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT 480
           IE+RP+  Q+DDLL EI + +   +RVLVTTLTKRM+E+L  +L   G++ RY+HS++ +
Sbjct: 421 IEVRPSGDQIDDLLEEIDQTIKKGDRVLVTTLTKRMAEELNKFLERAGIKSRYIHSEVKS 480

Query: 481 VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA 540
           ++RVEI+R+LRLG FDVLVG+NLLREGLD+PEVSLVAILDADKEGFLR+ERSL+QTIGRA
Sbjct: 481 LDRVEILRELRLGIFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRNERSLVQTIGRA 540

Query: 541 ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATV 600
           ARN NGR I+YADR+T SM+RAI ET+RRR  Q+A+N E+GITPK V K    IM    V
Sbjct: 541 ARNENGRVIMYADRVTASMQRAIDETKRRRSIQMAYNEEHGITPKTVIKSKDKIMGQTKV 600

Query: 601 PGSRSKKRKGMAKAAEESAKYEN---ELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQT 657
             S+   +       EE+A   +   +  S  ++ K I Q +++M + A++L F  AA+ 
Sbjct: 601 ADSKKNAKFYDDHFTEENAYAADPVVQYLSKEKLEKLIPQTQKQMEKAAKELNFMEAARL 660

Query: 658 RDEIGKLRERL 668
           RDE    ++RL
Sbjct: 661 RDEWQGQKKRL 671