Pairwise Alignments

Query, 227 a.a., response regulator from Pseudomonas fluorescens SBW25

Subject, 240 a.a., DNA-binding response regulator in two-component regulatory system with BaeS (NCBI) from Escherichia coli BW25113

 Score =  258 bits (660), Expect = 5e-74
 Identities = 135/228 (59%), Positives = 172/228 (75%), Gaps = 5/228 (2%)

Query: 1   MSEESP-ILIVEDEPKLAALLQDYLVAAGYPTLCLDNGLQVVPTVRAQPPRLILLDLMLP 59
           + E +P ILIVEDEPKL  LL DYL AA Y    + +G QV+P VR  PP LILLDLMLP
Sbjct: 6   IDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLP 65

Query: 60  GRDGMQVCQDLRGFSAVPIIMITARVEEVDRLLGLDLGADDYICKPFSPREVVARVKAIL 119
           G DG+ +C+++R FS +PI+M+TA++EE+DRLLGL++GADDYICKP+SPREVVARVK IL
Sbjct: 66  GTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTIL 125

Query: 120 RR-GPQ---LLSSTPARLLIDETQYRASLDGVALDLTPLELRLLSTFARSAGRVFSRDQL 175
           RR  PQ         + L+IDE +++AS  G  LDLTP E RLL T +   G+VFSR+QL
Sbjct: 126 RRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQL 185

Query: 176 LDKLYSDHRVVTDRTVDSHIRNLRRKLEQACPGETPIESLYGVGYRFQ 223
           L+ LY D+RVVTDRT+DSHI+NLRRKLE     ++ I ++YGVGYR++
Sbjct: 186 LNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWE 233