Pairwise Alignments

Query, 1073 a.a., efflux RND transporter permease subunit from Pseudomonas fluorescens SBW25

Subject, 1029 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  567 bits (1460), Expect = e-165
 Identities = 333/1057 (31%), Positives = 552/1057 (52%), Gaps = 47/1057 (4%)

Query: 16   IVLAIFICIIGPMAALRTPTDVFPDIGIPVVAVVWQYNGLSPDAMAGRVIYTYERSLSTT 75
            +V  + I     ++    P D+FP +G P + V   Y GL+P+ + G +   YE      
Sbjct: 1    MVALLAIVFFAVLSIRNMPVDIFPKLGTPTIYVAQTYGGLAPNQIEGFMTSYYEYHF-LY 59

Query: 76   VNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQMPPGITPPLILNYSA 135
            +N I+ +ES+++ G+ ++K+ F  G D+  A A+V A        MPPG  PP I  +  
Sbjct: 60   INGIKEVESKTIQGVSLMKLTFHEGTDMSQALAEVVAQVNRSRAFMPPGTVPPFITRFDG 119

Query: 136  STVPILQMAFSSPSLSEARIRDLVQNNIRLPLSALPGLAMPTPMGGKQRQITLDLDPQAL 195
               P+ Q+ FSS S S   I+DL    +R   +++PG++ P P GG QR + +  DP  L
Sbjct: 120  GGAPVGQLVFSSESRSLGEIQDLALFKVRPKFASIPGVSAPPPFGGNQRTVLIKADPSKL 179

Query: 196  AAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTILLNNSPKAIDELNDLPIKTVDGALI 255
             +  +S  ++  A+A  N I P G  +       +  N     I EL ++P+K   G  +
Sbjct: 180  RSYNISPDELVMAIAKGNTISPSGNIRTADKLLIVNQNTVVSDIQELANIPLKKGSGPAV 239

Query: 256  TIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTLSIIDGIRQMLPRINETLPPS 315
             +  VA V++GS   +    ++G R+V +P  K  S ST  ++  I+  LP +   +P  
Sbjct: 240  YVRDVAEVQNGSDVASGYALINGSRSVYIPVTKRASASTWDVVRRIKASLPEMQAAVPDD 299

Query: 316  LKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLGSWRSTIIIAASIPLAVLSAI 375
            +K S   D S +V  S+ +++ EGI+ A+LT  M+LLFLG  RS +I+  +IPLA+LSAI
Sbjct: 300  IKVSYEFDQSGYVINSLKTLSFEGILGAVLTGLMVLLFLGDRRSALIVILTIPLAILSAI 359

Query: 376  ALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKPVKTAILDGAAQIVGP 435
              L ++GQT+N+MTLGGLALA+GILVD++TVTIENI+ H E GK    AILD   +I  P
Sbjct: 360  VCLYLTGQTINIMTLGGLALAIGILVDESTVTIENIHRHQEMGKTKTRAILDACKEIALP 419

Query: 436  AFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFAMASSFILSRTLVPTLAMFLLKPHT 495
              + L+ I  VFVP F + G    +F P+ LAV FAM +SF+LS+T+VP L+ + LK H 
Sbjct: 420  KLLILISILAVFVPSFFMSGTPRAMFLPLTLAVGFAMIASFLLSQTMVPILSNWFLKDHV 479

Query: 496  PEPGAGHHPEDEFINHHEGEQHTQQRNAVLQSVLNFQQGFERHFSNIRDTYHGLLTLALG 555
            P+   G                                     F   R+   G  T  + 
Sbjct: 480  PQKEDG------------------------------------KFHRFRNRVTG-YTKGIT 502

Query: 556  NRKRFIVGFLACVLASFL--LLPSLGQDFFPATDAGALALHVRLPLGTRIEESAAAFDRI 613
            N+  + +G    V+ + L  L    G + FP  ++G L + +R+P GTRIE +     + 
Sbjct: 503  NKGGWAIGIYLAVIVAMLASLWQFTGTEIFPKVNSGQLQVRLRMPDGTRIENTEEKTKQF 562

Query: 614  EARIREIIPAEELDTIVDNIGIPLSGIDMAYSSSGTIGPQDGDIQVSLKKDHAPTADYVK 673
               + E++  E ++     +GI      +      T GP +  +++ LK+         +
Sbjct: 563  LEVVNEVVGKENVEITSAFVGIQPPSYPVNTIFLWTGGPHEAVVKIKLKETGQDLDVLKE 622

Query: 674  KLREALPHSFPGSHFAFLPADISSQILNFGAPAPLDVKISGRSDEENRAYAVELERRLQH 733
             LR+ +  + P    +F PAD+  Q+++ GA   +++ + G++  E+R +A  ++ R++ 
Sbjct: 623  TLRKRIAEAIPDMRLSFEPADLVDQVMSQGANTSVEIAVQGKNLSESRKFAEAIKDRIEG 682

Query: 734  VPGIADLRIQQSTGYPSLQVNVDRMRANGLGITERDVTNSMVASLAGSSQVAPTFWLNPA 793
            +  + D++      YPS+ +  DR+RA  LG+T  D++ S+ AS + S    P +WL+  
Sbjct: 683  LSFMRDVQFGIPLNYPSIDLEYDRVRAGQLGLTIEDISRSVTASTSSSRFTQPNYWLDAG 742

Query: 794  NGVSYSIVAATPQYRLDSLPSLEALPVTGADGQSQILGGVATISRVQSPAVVTHYNIEPT 853
            +G +Y +    PQY +D    +E +P+   +G++   G V               N +  
Sbjct: 743  SGHAYQVQVEFPQYLIDQPDDIERVPLKSENGKTVYAGDVGKWEPATMIGEYDRLNQQRF 802

Query: 854  LDLYANVQGRDLGGVARDVQKVLDDTAALRPKGAVISLHGQIDALHEAFSGLSLGLLGAV 913
            + +  N+  +DLGG  + ++  L       P G  +   G  + L + F+ LS GLL AV
Sbjct: 803  ITITGNLHNKDLGGAIKTLRNEL-KAMGDPPAGMSVKFRGLAETLTQTFNELSTGLLLAV 861

Query: 914  VLIYLLIVVNFQSWSDPFVIITALPAALAGIVWMLFLSGTSLSVPALTGAILCMGVATAN 973
             +I+LL+  NFQS+   F +++ +PA +AG   ++++SG++L++ +  G+I+ +GVA AN
Sbjct: 862  AVIFLLLAANFQSFRLSFAVLSTVPAVIAGSFLLIWISGSTLNIQSFMGSIMAIGVAVAN 921

Query: 974  SILVVSFCRERLAEHGDALKAAMEAGYTRFRPVCMTALAMIIGMLPLAI----SEEQNAP 1029
            +IL V+   +   +        +E    R RP+ MT +AMI GM P+A+      EQ AP
Sbjct: 922  AILFVTIAEQYRKDQRQ--NPHLEGIKDRLRPILMTTIAMIAGMTPMALGLGEGGEQTAP 979

Query: 1030 LGRAVIGGLIFATLATLLFVPVVFSLVHGRQPTRAVA 1066
            LG AVIGGL+F+  AT+  +P ++  + GR+  ++++
Sbjct: 980  LGIAVIGGLLFSVFATVFMLPAIYWQLIGRKHYKSIS 1016