Pairwise Alignments

Query, 624 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas fluorescens SBW25

Subject, 639 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  223 bits (569), Expect = 2e-62
 Identities = 178/641 (27%), Positives = 306/641 (47%), Gaps = 39/641 (6%)

Query: 1   MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60
           M  +IR++ +  +   +I II + + F GIE  +     S   VA V+G++IT+ E  QA
Sbjct: 1   MFDSIRNHKKYLMGFLMILIIPSFVLF-GIEG-YTRFNESGAPVAVVDGKDITKAEWDQA 58

Query: 61  VDMQRRQLMQQLGKDFDASLLDEKLLREAALKSLIDRKLLLQGAADSKFGFSEAALDQVI 120
              Q  Q +++     D+SLLD +  R A L+ L+ ++LL   A       S+A L + +
Sbjct: 59  -HQQESQRLREAMPSIDSSLLDSEGARYATLERLVRQRLLAAAATKLNLYTSDARLARDL 117

Query: 121 LQTPEFQV----DGKFNAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTD 176
            Q          DG  + E + Q++ + G +   F   +  ++   QV  GI GSGF   
Sbjct: 118 QQNEAIATLRKPDGSLDVEAYRQLVARQGLTPEMFEARVRADLSQRQVSQGILGSGFAPT 177

Query: 177 SEVLAFARLEKQTRDFATVNIKANPAA--VKLTDDEVKAYYDQHAKEFMTPDQVVIDYLE 234
           +          + R+       A   A  V+ TD +++A+Y  +   F  P+Q  I+YL 
Sbjct: 178 ALASVSLNAFFERREVRVARFAAGDFASQVQPTDADIEAFYSANQASFQAPEQAEIEYLV 237

Query: 235 LKKSSFFDQVAVKDDELQAAYQKETANLA--EQRRAAHILIEVNDKVTDAQAKA---KIE 289
           L  ++  + V+    +++A Y +  + L+  E+RRA HIL+ V      A   A   + E
Sbjct: 238 LDAAALQNSVSFNPSDVKAYYDQNASRLSGTEERRARHILLTVPAGAPAADKDAVRKRAE 297

Query: 290 EIQARL-AKGEKFEALAKEFSQDPGSASNGGDLGFAGPGVYDPDFETALYALSKDQVSAP 348
           E+ A++ AK   F  +AK  S+DPGSAS GGDL + G G     FE A+++L+K  +S  
Sbjct: 298 ELLAQVRAKPASFADVAKAESKDPGSASKGGDLDYFGRGAMVKPFEDAVFSLAKGAISDV 357

Query: 349 VRSTFGWHLIKLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAFEASDL 408
           V + FG+H+I+L  ++AP V +F S++ ++  EL+ Q  ++++ EA     +  +E +D 
Sbjct: 358 VETDFGFHIIQLTDIKAPPVRSFESMRPEIEAELRKQLAQKQYAEAADTFSNLVYEQADS 417

Query: 409 AQPASD-LKLTVH--TSAPFGREGGEGVAANRAVVTAAFSPEVLDEGANSTAIELDPETI 465
            QPA+D LKL +   T     + G  GV  N  ++ A F  E +D+  N+ AI+     +
Sbjct: 418 LQPAADRLKLQIRKATVQRHAQPGATGVLTNERLLGALFDTESIDKKRNTEAIDTGSGQL 477

Query: 466 IVLRAKEHLKPAQLPLESVAAAIRTQMAKERASAAAKTHADELIASLRDGKTPLNQPVDG 525
           +  R  +H      PL  V   +R ++  +R +  A+   ++ + + + G         G
Sbjct: 478 VSGRVVKHSPAHTQPLAEVRDQVRARLVAQRTAELARAEGEKQLQAWKSG---------G 528

Query: 526 QAWKVTEAATRSQET----IDPAVLQALFRMPKPAAKDKPTFTTVTLADGSLVIVRLNGV 581
           +A  +  A   S+E       P +  AL   PK      P +  V L D    +V++  V
Sbjct: 529 EAKGLGNAVVVSRENPQGLAQPVLTAALSADPKTL----PAWVGVNLPDQGYAVVKVEKV 584

Query: 582 ----NEAAAPTDEEKAQYRRFLASRVGQQDFAAYRKQLETK 618
                 AA    +E  QY ++ AS   +    A +++ + +
Sbjct: 585 LPRDLRAAPALAQEVQQYNQWWASAENEAYVDALKERFKVR 625