Pairwise Alignments

Query, 624 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas fluorescens SBW25

Subject, 623 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  246 bits (627), Expect = 3e-69
 Identities = 187/650 (28%), Positives = 302/650 (46%), Gaps = 63/650 (9%)

Query: 1   MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60
           M+ ++R  +   + K I  II+     TG+       G S    AKVNG+EI++ +   A
Sbjct: 1   MMDSLRTAANSLVLKIIFVIIIVSFILTGVSGYL--IGGSNNYAAKVNGQEISRAQFENA 58

Query: 61  VDMQRRQLMQQLGKDFDASLLDE---KLLREAALKSLIDRKLLLQGAADSKFGFSEAALD 117
            + +R ++ QQLG  +     +E   K LR+  L  LID  LL Q + + K G S+  + 
Sbjct: 59  FNNERNRMQQQLGDRYSELAANEGYMKSLRQQVLNRLIDEALLDQYSRELKLGISDEQVK 118

Query: 118 QVILQTPEFQVDGKFNAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDS 177
           Q I  TP FQVDGKF+  R++ ++ Q+G +  Q+ Q L  ++   Q+  G+AG+ F+   
Sbjct: 119 QAIFATPAFQVDGKFDNNRYNAIVNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKG 178

Query: 178 EVLAFARLEKQTRDF--ATVNIKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLEL 235
           E    A L  Q R    A +++ A  A  ++TD EV +YYDQ+   FMTP+Q  + Y++L
Sbjct: 179 ETDELAALVSQQRVVREAVIDVNALAAKQQVTDQEVSSYYDQNKVRFMTPEQFRVSYIKL 238

Query: 236 KKSSFFDQVAVKDDELQAAYQKETANLAEQRRAAHILIEVNDKVTDAQAKAKIEEIQARL 295
             ++   Q  V D ++QA Y +      +  R  + +I+     T+  AKA ++     L
Sbjct: 239 DAATM--QAPVSDADIQAYYDQHVDQFTQPERIRYSIIQTK---TEDDAKAVLD----AL 289

Query: 296 AKGEKFEALAKEFSQDPGSASNGGDLGFAGPGVYDPDFETALYALSKDQVSAPVRSTFGW 355
            KGE F  LAKE S D  SA NGGD+G+       P+ + A     K Q+S  ++S+ G+
Sbjct: 290 NKGEDFATLAKEKSTDIISARNGGDMGWLEESATVPELKNA-GLKEKGQISGVIKSSVGF 348

Query: 356 HLIKLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAFEASDLAQPASDL 415
            + +L  ++  +V   + ++D +  ++K ++    +    +++ DAA   ++        
Sbjct: 349 LVARLDDIQPAKVKPLSEVRDDIAAKVKQEKALDAYYALQQKVSDAASNDNE-------- 400

Query: 416 KLTVHTSAPFGREGGEGVAANRAVVTAAFSPEVLDE-----------------------G 452
                        G E VA  +AV T  FS + L E                       G
Sbjct: 401 ----------SLAGAEQVAGVKAVETGWFSRDTLPEELNFKPVADAIFNGGLVGENGTPG 450

Query: 453 ANSTAIELDPETIIVLRAKEHLKPAQLPLESVAAAIRTQMAKERASAAAKTHADELIASL 512
            NS  I +D +   V+R  EH   A  PL  V   +   +   +A   AK  A++L+  L
Sbjct: 451 PNSDIITVDGDRAFVVRVSEHKPEAVKPLAEVKEQVTALVKHNKAEQQAKLDAEKLLVEL 510

Query: 513 RDGKTPLNQPVDGQAWKVTEAATRSQETIDPAVLQALFRMPKPAAKDKPTFTTVTLADGS 572
           + GK        G ++   E  T S+ + DP V QA F +  P  KDKP +       G+
Sbjct: 511 KAGKGAEAMKAAGLSF--GEPKTLSRTSQDP-VSQAAFALSLP-TKDKPVYGVANDMQGN 566

Query: 573 LVIVRLNGVNEAAAPTDEEKAQYRRFLASRVGQQDFAAYRKQLETKADIK 622
           +V++  + V   A P  ++KA  +  +     Q  F A    L  +A IK
Sbjct: 567 VVLLAFDEVKAGAMPEAQKKAMVQG-ITQNNAQIVFEALMSNLRKEAKIK 615