Pairwise Alignments

Query, 624 a.a., peptidyl-prolyl cis-trans isomerase from Pseudomonas fluorescens SBW25

Subject, 623 a.a., periplasmic folding chaperone, has an inactive PPIase domain from Escherichia coli BL21

 Score =  261 bits (667), Expect = 6e-74
 Identities = 187/634 (29%), Positives = 318/634 (50%), Gaps = 31/634 (4%)

Query: 1   MLQNIRDNSQGWIAKTIIGIIVALMAFTGIEAIFQASGNSKQDVAKVNGEEITQTELSQA 60
           M+ ++R  +   + K I GII+     TG+       GN+    AKVN +EI++ +   A
Sbjct: 1   MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNY--AAKVNDQEISRGQFENA 58

Query: 61  VDMQRRQLMQQLGKDFDASLLDE---KLLREAALKSLIDRKLLLQGAADSKFGFSEAALD 117
            + +R ++ QQLG  +     +E   K LR+  L  LID  LL Q A + K G S+  + 
Sbjct: 59  FNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVK 118

Query: 118 QVILQTPEFQVDGKFNAERFDQVIRQLGYSRLQFRQMLTQEMLIGQVRAGIAGSGFVTDS 177
           Q I  TP FQVDGKF+  R++ ++ Q+G +  Q+ Q L  ++   Q+  G+AG+ F+   
Sbjct: 119 QAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKG 178

Query: 178 EVLAFARLEKQTRDF--ATVNIKANPAAVKLTDDEVKAYYDQHAKEFMTPDQVVIDYLEL 235
           E    A L  Q R    AT+++ A  A   +T+ E+ +YY+Q+   FMTP+Q  + Y++L
Sbjct: 179 ETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKL 238

Query: 236 KKSSFFDQVAVKDDELQAAYQKETANLAEQRRAAHILIEVNDKVTDAQAKAKIEEIQARL 295
             ++   Q  V D ++Q+ Y +      + +R  + +I+     T+ +AKA ++E    L
Sbjct: 239 DAATM--QQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTK---TEDEAKAVLDE----L 289

Query: 296 AKGEKFEALAKEFSQDPGSASNGGDLGFAGPGVYDPDFETALYALSKDQVSAPVRSTFGW 355
            KG  F ALAKE S D  SA NGGD+G+        + + A     K Q+S  ++S+ G+
Sbjct: 290 NKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNA-GLKEKGQLSGVIKSSVGF 348

Query: 356 HLIKLLGVEAPQVPTFASLKDKLTKELKTQQVEQRFVEATKQLEDAAFEASDL---AQPA 412
            +++L  ++  +V +   ++D +  ++K ++    +    +++ DAA   ++    A+ A
Sbjct: 349 LIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQA 408

Query: 413 SDLKLTVHTSAPFGREGGEGVAANRAVVTAAFSPEVLDE----GANSTAIELDPETIIVL 468
           + +K T   +  F ++        + V  A F+  ++ E    G NS  I +D +   VL
Sbjct: 409 AGVKAT--QTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVL 466

Query: 469 RAKEHLKPAQLPLESVAAAIRTQMAKERASAAAKTHADELIASLRDGKTPLNQPVDGQAW 528
           R  EH   A  PL  V   ++  +    A   AK  A++L+  L+ GK    + +     
Sbjct: 467 RISEHKPEAVKPLADVQEQVKALVQHNNAEQQAKVDAEKLLVDLKAGKGA--EAMQAAGL 524

Query: 529 KVTEAATRSQETIDPAVLQALFRMPKPAAKDKPTFTTVTLADGSLVIVRLNGVNEAAAPT 588
           K  E  T S+   DP + QA F +P P AKDKP++   T   G++V++ L+ V + + P 
Sbjct: 525 KFGEPKTLSRSGRDP-ISQAAFALPLP-AKDKPSYGMATDMQGNVVLLALDEVKQGSMPE 582

Query: 589 DEEKAQYRRFLASRVGQQDFAAYRKQLETKADIK 622
           D++KA  +  +     Q  F A    L  +A IK
Sbjct: 583 DQKKAMVQG-ITQNNAQIVFEALMSNLRKEAKIK 615