Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III from Pseudomonas fluorescens SBW25

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 4e-43
 Identities = 105/270 (38%), Positives = 142/270 (52%), Gaps = 16/270 (5%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           +KI +FNING+R+R   L A +E+ QPD+  LQE K  D QFP AE++A GY   +HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 61  GHYGVALLSR-QPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDH 119
              GVA+L R    L + +G    EED+Q R++    A  HG  V  +  Y P G     
Sbjct: 64  SWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYL---EAAAHGVLVACL--YLPNGNPLPG 118

Query: 120 PTKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCS 179
           P KF  K  ++E L Q   S   +    ++ GD N+ P D DI     N + WLK     
Sbjct: 119 P-KFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDI----YNPRSWLKDALLQ 173

Query: 180 FLPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNG 239
             PE R    RL + G +D+ RHL PD      W  +R+    +    GLRID ++ +  
Sbjct: 174 --PESRACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARN---AGLRIDHLLLNRE 228

Query: 240 LLPRVKDAGVDYDLRGLEKPSDHAPIWLEL 269
           L P +K AGVD  +R   K SDHAP+W+EL
Sbjct: 229 LAPYLKRAGVDAWVRNQAKASDHAPVWIEL 258