Pairwise Alignments

Query, 270 a.a., exodeoxyribonuclease III from Pseudomonas fluorescens SBW25

Subject, 268 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  376 bits (965), Expect = e-109
 Identities = 173/266 (65%), Positives = 211/266 (79%), Gaps = 3/266 (1%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           MK VSFNINGLRARPHQL A++EKHQPDVIGLQETKVHD+ FPL EV  LGY+V+YHGQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP 120
           GHYGVALL++   +S+ +GF  D E+AQRR I        G  +T++NGYFPQGESRDHP
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGN-ITVINGYFPQGESRDHP 119

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180
            KFPAK +FY++LQ  LE++   D  +++MGD+NISP D DIGIG +N KRWL+TGKCSF
Sbjct: 120 LKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSF 179

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGL 240
           LPEEREWM+RL  WGLVD+FR  NP  +D+FSWFDYRS+GF D   RGLRID+++AS  L
Sbjct: 180 LPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVD--NRGLRIDLLLASAPL 237

Query: 241 LPRVKDAGVDYDLRGLEKPSDHAPIW 266
             R  + G+DYD+R +EKPSDHAP+W
Sbjct: 238 AERCAETGIDYDIRSMEKPSDHAPVW 263