Pairwise Alignments

Query, 343 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  246 bits (629), Expect = 5e-70
 Identities = 139/340 (40%), Positives = 204/340 (60%), Gaps = 6/340 (1%)

Query: 6   IRLQGCRKAFADGTVAVHDLNLTVEGGETLAILGPSGCGKTTTLRLIAGLERPDVGQVFF 65
           + L+   K F   TV + ++NLT+  G+ + +LGPSGCGKTT LRL+AGLE+P  GQ+F 
Sbjct: 7   VELRNVTKRFGSNTV-IDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFI 65

Query: 66  GDQDVTRLPIERRDVGMVFQNYALFPNLDVAGNIVYGLKIRGMSVPERNKRCDELLELVG 125
             +DVT   I++RD+ MVFQ+YALFP++ +  N+ YGLK+ G+   E   R  E L +V 
Sbjct: 66  DGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVD 125

Query: 126 LQHHGKRSIHELSGGQRQRVALARALAPRPKVLLLDEPLAALDAQLRERLRSELNELLRG 185
           L+    R + ++SGGQ+QRVALARAL  +PKVLL DEPL+ LDA LR  +R ++ EL + 
Sbjct: 126 LEGFEDRFVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185

Query: 186 LGITSVFVTHDQGEAMALGDRILVMEHGRVAQLASPRDIYQKPANAFVAGFVGNLNAFAV 245
             ITS++VTHDQ EA A+ D +LVM  G + Q+ SP+D+Y++PA+ F+A F+G+ N F  
Sbjct: 186 FDITSLYVTHDQSEAFAVSDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPA 245

Query: 246 IEPSAHGLKVCGGELP---WHGADLPSTIYCRPEHLRVME-GEGHLHGHLLAQFFQGAQS 301
                + + + G  LP     G      +  RPE + + + GE      +    + G Q 
Sbjct: 246 TFSDGY-VDIYGYHLPRPLHFGTQGEGMVGVRPEAITLSDRGEESQRCVIRHVAYMGPQY 304

Query: 302 RLLVDVGGPQPLLVDSSDNQLYTVGAPIALAIAPHMLFTL 341
            + V+  G + LL  ++      VG    L I P+ +F L
Sbjct: 305 EVTVEWHGQEILLQVNATRLQPDVGEQYYLEIHPYGMFVL 344