Pairwise Alignments

Query, 785 a.a., DNA polymerase II from Pseudomonas fluorescens SBW25

Subject, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

 Score = 1199 bits (3101), Expect = 0.0
 Identities = 587/786 (74%), Positives = 660/786 (83%), Gaps = 1/786 (0%)

Query: 1   MDLQQGFVLTRHWRDTPTGTEVSFWLATDQGPRFIRLPVQTSVMFVPEAHRKPLDWLLKG 60
           M+LQQGFVLTRHW DTP GT V FWLATD GPR +RL  Q SV F+P+A  +    LL  
Sbjct: 1   MELQQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLAN 60

Query: 61  ERDIELRPLQLCDFHHRPVLGLYTRQHRQAMDVEKRLRAAGVDVYEGDVRPPERYMMERF 120
           E   +L+PL+L DF HRP+LGLYTRQHRQ M +E+RLR AG+DV+E D+RPPERY+MERF
Sbjct: 61  ETGTKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERF 120

Query: 121 ITAPVWFGGTPDTSGVLCDAQMKPAPDYRPPLKLVSLDIETTAQGDLYSIALEGCGERQV 180
           ITAPV F G PD  GV  DAQ+KP P YRP L+LVSLDIET+ +G+LYSIALEGCG+RQV
Sbjct: 121 ITAPVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQV 180

Query: 181 YMLGPPN-KTDAVDFKLDYCDTRAQLLERLNEWLAQHDPDAIIGWNVVQFDLRVLHEHAQ 239
           YMLGP N     +DF L+YC  RA L+ RLN+W+A+HDPDAIIGWN+VQFDLR+LHEHA+
Sbjct: 181 YMLGPANGDASGLDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAK 240

Query: 240 RLNVPLMLGRGDEPMAWREHGSRNHYFAAAAGRLIIDGIEALRSATWSFESFSLENVAQT 299
            L VPL LGR    M  R H    H FA A GRL+IDGIEALRSATWSF SFSLENVAQT
Sbjct: 241 SLQVPLALGRNGAVMTLRSHAGGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQT 300

Query: 300 LLGEGKDISTPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFEKTELLKFLLERASVT 359
           LLGEGK I TPYQRMDEINR FAEDKPALARYNLKDCELVTRIF  T LL FLLERASVT
Sbjct: 301 LLGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASVT 360

Query: 360 GLPADRNGGSVAAFTHLYMPLMHRQGFVAPNLGDKPPQASPGGFVMDSRPGLYESVLVLD 419
           GL  DR+GGSVAAF HLY+P MHR GFVAP+LG +P +ASPGGFVMDSRPGLY+SVLVLD
Sbjct: 361 GLAVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVLD 420

Query: 420 YKSLYPSIIRSFLIDPVGLIEGLKYPDDSDSVEGFRGARFSRTRHCLPAIVARVSEGREV 479
           YKSLYPSIIR+FLIDPVGLIEGL+ PDD+ SVEGFRG RFSRT+HCLPAIV RV +GRE 
Sbjct: 421 YKSLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGREA 480

Query: 480 AKREHNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITMRGHQIMRQTRELVEAQGY 539
           AKRE NAPLSQALKIIMNAFYGVLGSSGCRFFD RLASSITMRGHQIMRQTR L+EA GY
Sbjct: 481 AKREGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACGY 540

Query: 540 EVIYGDTDSTFVWLGSAHSQEEASRIGRGLVQHVNDWWREHLHTTFGLQSALELQYETHF 599
           +VIYGDTDSTFVWL  AH++E+A+RIGR LV  VN WW+ HLH T  L SALELQ+E H+
Sbjct: 541 DVIYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVHY 600

Query: 600 TRFLMPTIRGAEEGSKKRYAGLVVRSDGSEDMVYKGLETVRSDWSPLARRFQQELYQRIF 659
            RFLMPTIRG +EGSKKRYAGLV R+DG+E+MVYKGLE+VR+DWSPLAR+FQQELY R+F
Sbjct: 601 RRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRVF 660

Query: 660 HRQPHQDYIRDYVRRTLSGEFDELLIYRKRLRRRLDDYERNVPPHVRAARLADEYNDRLN 719
             +P++DY+R+YVRRTL+GE DELL+YRKRLRR L DY+RNVPPHVRAARLAD+YN RL 
Sbjct: 661 RSEPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRLQ 720

Query: 720 RPRQYQRGGWISYVISVNGPEPLEVRQAPIDYDHYVTRQLQPVADAILPFVNDDFSTLVG 779
           RP QYQRGGWISYVI+  GPEPLE  QAPIDYDHY++RQL PVADAILPFV DDF+ L  
Sbjct: 721 RPLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLTD 780

Query: 780 GQMGLF 785
            Q+ LF
Sbjct: 781 HQLLLF 786