Pairwise Alignments

Query, 785 a.a., DNA polymerase II from Pseudomonas fluorescens SBW25

Subject, 783 a.a., DNA polymerase II from Escherichia coli BL21

 Score = 1075 bits (2781), Expect = 0.0
 Identities = 526/784 (67%), Positives = 623/784 (79%), Gaps = 5/784 (0%)

Query: 4   QQGFVLTRHWRDTPTGTEVSFWLATDQGPRFIRLPVQTSVMFVPEAHRKPLDWLLKGERD 63
           Q GF+LTRHWRDTP GTEVSFWLATD GP  + L  Q SV F+P         +L+GE+ 
Sbjct: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQG 62

Query: 64  IELRPLQLCDFHHRPVLGLYTRQHRQAMDVEKRLRAAGVDVYEGDVRPPERYMMERFITA 123
           + L PL L DFH +PV GLY R HRQ M+ EKRLR  GV VYE DVRPPERY+MERFIT+
Sbjct: 63  VRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITS 122

Query: 124 PVWFGGTPDTSGVLCDAQMKPAPDYRPPLKLVSLDIETTAQGDLYSIALEGCGERQVYML 183
           PVW  G    +G + +A++KP PDYRPPLK VS+DIETT  G+LY I LEGCG+R VYML
Sbjct: 123 PVWVEGDMH-NGAIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYML 181

Query: 184 GPPN-KTDAVDFKLDYCDTRAQLLERLNEWLAQHDPDAIIGWNVVQFDLRVLHEHAQRLN 242
           GP N    A+DF+L+Y  +R QLLE+LN W A +DPD IIGWNVVQFDLR+L +HA+R  
Sbjct: 182 GPENGDASALDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYR 241

Query: 243 VPLMLGRGDEPMAWREHGSRNH-YFAAAAGRLIIDGIEALRSATWSFESFSLENVAQTLL 301
           +PL LGR +  + WREHG +N  +FA A GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 242 IPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELL 301

Query: 302 GEGKDISTPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFEKTELLKFLLERASVTGL 361
           GEGK I  P+ RMDEI+R FAEDKPALA YNLKDCELVT+IF KTE++ FLLERA+V GL
Sbjct: 302 GEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 361

Query: 362 PADRNGGSVAAFTHLYMPLMHRQGFVAPNLGDKPPQASPGGFVMDSRPGLYESVLVLDYK 421
           P DR+GGSVAAF HLY P MHR G+VAPNLG+ PP ASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYK 421

Query: 422 SLYPSIIRSFLIDPVGLIEGLKYPDDSDSVEGFRGARFSRTRHCLPAIVARVSEGREVAK 481
           SLYPSIIR+FLIDPVGL+EG+  PD   S EGF  A FSR +HCLP IV  +  GR+ AK
Sbjct: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAK 481

Query: 482 REHNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITMRGHQIMRQTRELVEAQGYEV 541
           R+ N PLSQALKIIMNAFYGVLG++ CRFFD RLASSITMRGHQIMRQT+ L+EAQGY+V
Sbjct: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDV 541

Query: 542 IYGDTDSTFVWLGSAHSQEEASRIGRGLVQHVNDWWREHLHTTFGLQSALELQYETHFTR 601
           IYGDTDSTFVWL  AHS+EEA++IGR LVQHVN WW E L     L SALEL+YETHF R
Sbjct: 542 IYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQ-RLTSALELEYETHFCR 600

Query: 602 FLMPTIRGAEEGSKKRYAGLVVRSDGSEDMVYKGLETVRSDWSPLARRFQQELYQRIFHR 661
           FLMPTIRGA+ GSKKRYAGL+   D  + MV+KGLETVR+DW+PLA++FQQELY RIF  
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGD-KQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRN 659

Query: 662 QPHQDYIRDYVRRTLSGEFDELLIYRKRLRRRLDDYERNVPPHVRAARLADEYNDRLNRP 721
           +P+Q+Y+R+ + + ++GE D  L+YRKRLRR L +Y+RNVPPHVRAARLADE N +  RP
Sbjct: 660 EPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRP 719

Query: 722 RQYQRGGWISYVISVNGPEPLEVRQAPIDYDHYVTRQLQPVADAILPFVNDDFSTLVGGQ 781
            QYQ  G I YV + NGPEPL+ +++P+DY+HY+TRQLQPVA+ ILPF+ D+F+TL+ GQ
Sbjct: 720 LQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQ 779

Query: 782 MGLF 785
           +GLF
Sbjct: 780 LGLF 783