Pairwise Alignments

Query, 310 a.a., ABC transporter ATP-binding protein from Pseudomonas fluorescens SBW25

Subject, 320 a.a., ABC-type multidrug transport system, ATPase component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  229 bits (585), Expect = 5e-65
 Identities = 130/306 (42%), Positives = 186/306 (60%), Gaps = 11/306 (3%)

Query: 5   LSIRQLTKTYGNGFQALSGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGTVNI 64
           +S+R ++KTY  GFQAL  +DLD+  G+ FALLGPNGAGK+T I I+  + N + G V  
Sbjct: 15  VSVRGVSKTYAGGFQALKRVDLDIRRGEIFALLGPNGAGKTTLISIVCGIANASEGVVIA 74

Query: 65  FGHDLDKSPAALKRSIGVVPQEFNFNQFEKTFDIVVTQAGYYG-IPAKVAKERAEQYLTQ 123
            GHD  +   A + +IG+VPQE + + FE  +  V    G +G  P  V  E+    L  
Sbjct: 75  DGHDTVRDYRAARAAIGLVPQELHTDAFESVWATVNFSRGLFGKAPDPVYIEKV---LRD 131

Query: 124 LGLWDKRDVPSRSLSGGMKRRLMIARALVHEPRLLILDEPTAGVDIELRRSMWTFLTELN 183
           L LWDK+D    +LSGGMKRR++IA+AL HEP++L LDEP+AGVD+ELR  MW  + EL 
Sbjct: 132 LSLWDKKDNKILTLSGGMKRRVLIAKALSHEPKILFLDEPSAGVDVELRHDMWRMVRELR 191

Query: 184 EKGITIILTTHYLEEAEQLCRNIGIIDHGTIVENTSMRNLLGQLHVETFLLDLKNNLS-V 242
           ++G TIILTTHY+EEAE +   IG+I+ G ++       L+ +L  +   + L++ L  +
Sbjct: 192 DRGTTIILTTHYIEEAEDMADRIGVINRGELIVVEDKDVLMRKLGKKQLTITLQHPLDRL 251

Query: 243 PPQLLGYPSRLVD-----SHTLEVQVDKAMGITALFTQLATQNIEVLSLRNKTNRLEELF 297
           P  L  +P  L       ++T + Q D+  GI  L   L  Q I+   L++  + LE++F
Sbjct: 252 PEALARWPLELTGAGHTLTYTFDTQKDET-GIAELLRTLHAQGIDFKDLQSSESSLEDIF 310

Query: 298 VSLVEK 303
           VSLV K
Sbjct: 311 VSLVHK 316