Pairwise Alignments

Query, 557 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens SBW25

Subject, 557 a.a., RNA helicase from Pseudomonas simiae WCS417

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 550/557 (98%), Positives = 555/557 (99%)

Query: 1   MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGQDMIGQAQTGTGKTAAF 60
           MTQETGGFAAFNLNPNILAAV ATGYEEPSAIQQQSIPIIMAG+DMIGQAQTGTGKTAAF
Sbjct: 1   MTQETGGFAAFNLNPNILAAVAATGYEEPSAIQQQSIPIIMAGKDMIGQAQTGTGKTAAF 60

Query: 61  ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 120
           ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
Sbjct: 61  ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 120

Query: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT 180
           AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT
Sbjct: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT 180

Query: 181 RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240
           RQTVLFSATLPQSIRAIAERHLRDP+HVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLRDPEHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240

Query: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300
           EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
Sbjct: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300

Query: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360
           ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360

Query: 361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLAPLVADAESTHGDLLDRLTADIGCTPRAL 420
           ERVTGQKVAEVRLPDAQAVLDARIKKLTNSL+PLVADAESTHGDLLDRLTADIGCTPRAL
Sbjct: 361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL 420

Query: 421 AAALLRKATNGQALTLAAIEKERPLVPNNAPRGDRPERTGDRPDRGDRERRAPVPLAEGR 480
           AAALLRKATNGQALTLAAIEKERPLVPN+APRGDRPER+GDRPDRGDRERRAPVPLAEGR
Sbjct: 421 AAALLRKATNGQALTLAAIEKERPLVPNSAPRGDRPERSGDRPDRGDRERRAPVPLAEGR 480

Query: 481 ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLTKLK 540
           ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLL KLK
Sbjct: 481 ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLAKLK 540

Query: 541 DTRVAGKQLKLRRYRED 557
           DTRVAGKQLKLRRYRED
Sbjct: 541 DTRVAGKQLKLRRYRED 557