Pairwise Alignments

Query, 352 a.a., recombinase RecA from Pseudomonas fluorescens SBW25

Subject, 353 a.a., recombinase A (NCBI) from Escherichia coli BW25113

 Score =  488 bits (1257), Expect = e-143
 Identities = 248/350 (70%), Positives = 292/350 (83%), Gaps = 4/350 (1%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           +D+NK+KALAAALGQIE+QFGKG++MR+G+     +  ISTGSL LDIALG GGLP GRI
Sbjct: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI D L RS A+DVIVVDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR GAVKEG+ VVGSE
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSE 242

Query: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNK+A PF+QAEFQILYG+GI   GE++DLGV    +EK+GAWY+Y G KIGQG
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQG 302

Query: 301 KANSAKFLADNPDIAATLEKQIRDKLLT---AAPDVKAAANREPVAEVEE 347
           KAN+  +L DNP+ A  +EK++R+ LL+   + PD  +  + E VAE  E
Sbjct: 303 KANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDF-SVDDSEGVAETNE 351