Pairwise Alignments

Query, 214 a.a., paraquat-inducible protein A from Pseudomonas fluorescens SBW25

Subject, 427 a.a., inner membrane PqiA domain protein from Escherichia coli BL21

 Score =  111 bits (277), Expect = 2e-29
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 10/201 (4%)

Query: 4   PPTASELNLCLCHSCGLSADISTGAPE----CQRCDAPLHRRKVNSLTRTWAYMLTALAF 59
           P T  +  L +C  C       TG P+    C RC  PL  R+ +SL + WA +L ++  
Sbjct: 222 PATRRDEKLRVCLGCHF-----TGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL 276

Query: 60  YVPANLLPVMNTTMLGSGADSTIMSGVLEFWEHGAWDIALIIFIASIAVPGIKFVSLMLL 119
            +PANLLP+    + G   + TI+SG++         +A I+FIASI VP  K + +  L
Sbjct: 277 LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNI-AVAGIVFIASILVPFTKVIVMFTL 335

Query: 120 LVTVQRNSRWARKERSKLFRFVELIGYWSMLDVIVVALVAALVKFQALGTIEPRLGILFF 179
           L+++    +   + R  L R V  IG WSMLD+ V++L  +L+    +          +F
Sbjct: 336 LLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYF 395

Query: 180 GLVVVFTMLAAMSFDPRLIWE 200
           G  V+ T+LA    D RL+W+
Sbjct: 396 GAAVILTILAVEWLDSRLLWD 416



 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 5/170 (2%)

Query: 31  CQRCDAPLHRRKVNSLTRTWAYMLTALAFYVPANLLPVMNTTMLGSGADSTIMSGVLEFW 90
           C RC A +   +  SLTR  A   T L     A   P+++  +LG   D+ +M G+ +  
Sbjct: 51  CPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMT 110

Query: 91  EHGAWDIALIIFIASIAVPGIKFVSLMLLLVTVQRNSRWARKERSKLFRFVELIGYWSML 150
           + G      ++F   I  P I   S+  L       +R     R  L   +E +  W ML
Sbjct: 111 KQGDTITGAMVFFCVIGAPLILVSSIAYLWF----GNRLGMNLRPVLL-MLERLKEWVML 165

Query: 151 DVIVVALVAALVKFQALGTIEPRLGILFFGLVVVFTMLAAMSFDPRLIWE 200
           D+ +V +  A +K Q    I+  +G+  F  +V+ T +     +   +WE
Sbjct: 166 DIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWE 215