Pairwise Alignments

Query, 214 a.a., paraquat-inducible protein A from Pseudomonas fluorescens SBW25

Subject, 417 a.a., paraquat-inducible, SoxRS-regulated inner membrane protein from Escherichia coli BL21

 Score =  153 bits (386), Expect = 5e-42
 Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)

Query: 10  LNLCLCHSCGLSADISTGAPECQRCDAPLHRRKVNSLTRTWAYMLTALAFYVPANLLPVM 69
           L  C C +  L AD     P C RC    + R+ NSL  T A ++T++  Y+PAN+LP+M
Sbjct: 221 LRSCSCCTAILPAD----EPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM 276

Query: 70  NTTMLGSGADSTIMSGVLEFWEHGAWDIALIIFIASIAVPGIKFVSLMLLLVTVQRNSRW 129
            T +LGS   STI++GV+  W  G++ +A +IF+ASI VP +K +++  L    + + + 
Sbjct: 277 VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKR 336

Query: 130 ARKERSKLFRFVELIGYWSMLDVIVVALVAALVKFQALGTIEPRLGILFFGLVVVFTMLA 189
             +    ++  VE +G WSM+DV V+A+++ALV+   L +I P +G L F LVV+ TM +
Sbjct: 337 DSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFS 396

Query: 190 AMSFDPRLIWE 200
           AM+FDPRL W+
Sbjct: 397 AMTFDPRLSWD 407



 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 8/172 (4%)

Query: 31  CQRCDAPLHRRKVNSLTRTWAYMLTALAFYVPANLLPVMNTTMLGSGADSTIMS--GVLE 88
           C RC   L         R  AY L AL   + +NL P +N  + G  ++ T++   GVL 
Sbjct: 33  CPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLF 92

Query: 89  FWEHGAWDIALIIFIASIAVPGIKFVSLMLLLVTVQRNSRWARKERSKLFRFVELIGYWS 148
             ++ +     ++F+    VP    ++++LL+   +   R     + +L R +  +  W 
Sbjct: 93  SEDYASLGTFFLLFVQ--LVPAFCLITILLLVNRAELPVRL----KEQLARVLFQLKTWG 146

Query: 149 MLDVIVVALVAALVKFQALGTIEPRLGILFFGLVVVFTMLAAMSFDPRLIWE 200
           M ++ +  ++ + VK  A G+I      L + L  V  + A    D R +W+
Sbjct: 147 MAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWD 198