Pairwise Alignments

Query, 215 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 211 a.a., predicted ABC-type organic solvent transporter (NCBI) from Escherichia coli BW25113

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 10/187 (5%)

Query: 9   LLVLLAALPLMANAAG---SAHDLVQDTTNKMLADLSANKEKYKQDPSQFYNALNTIVGP 65
           ++ LL   PL A  A    + + L+ +   K    L   + + + +P      ++  + P
Sbjct: 7   MVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIVDQELLP 66

Query: 66  VVDAEGISKSIMTVKYSRKATPAQMQTFQENFKKGLFQFYGNALLEYNNQGITVAPAGDE 125
            V  +  + +++  +Y + ATPAQ + +   F++ L Q YG AL  Y+ Q   +AP    
Sbjct: 67  YVQVK-YAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPE-QP 124

Query: 126 SGDRTSVNMSV-----KGNNGAVYPVQYTLEKVNGEWKLRNVIINGINIGKLFRDQFADA 180
            GD+T V + V      G        Q+      G W+  ++I  G+++    ++++   
Sbjct: 125 LGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNEWGTL 184

Query: 181 MQRNGND 187
           ++  G D
Sbjct: 185 LRTKGID 191