Pairwise Alignments

Query, 377 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  284 bits (726), Expect = 3e-81
 Identities = 152/358 (42%), Positives = 221/358 (61%), Gaps = 5/358 (1%)

Query: 8   KGFLALAVAAALGVSTFVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADVINKAGGING 67
           K F A+ +A   G S F    +KIG+AGP TG    +G+    GA+ A   IN  GG++G
Sbjct: 10  KLFAAMVLAGVAGHS-FAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDG 68

Query: 68  EKIVLVAGDDACEPKQAVAVANRLADQDKVIGVVGHFCSSNTIPASEVYDEAGIIAITPG 127
           + +     DDAC+PKQAVAVAN++ + D V  VVGH CSS+T PAS++Y++ G+I ITP 
Sbjct: 69  KMLEAKEYDDACDPKQAVAVANKVVN-DGVKFVVGHLCSSSTQPASDIYEDEGVIMITPA 127

Query: 128 STNPQVTERGLGAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVINDKDTYGKGLADATAA 187
           +T+P++T RG   +FR  G D  QG  AG+YI D +K K VAV++DK  YG+G+A A   
Sbjct: 128 ATSPEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQ 187

Query: 188 QLTKRGVKPVLEEGLTRGEKDFSALVTKIRSIGADVVYFGGLHPEAGPLVRQIREAGLKA 247
            L K+G K  + EGL  G+KDFS+++ K++    D VY+GG HPE G ++RQ +E GL A
Sbjct: 188 TLEKKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLNA 247

Query: 248 AFMSDDGVVTDELAKTAGGNQYVDGVYMTFGADPRLLPDSKAVVDDFRKAGYEPEG-YTL 306
            FM  +GV  D +++ A G    +G+ +T        P +KA+V++F K   +P G +  
Sbjct: 248 KFMGPEGVGNDSISQIAQGAS--EGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFVF 305

Query: 307 YAYASVQALAAGFNGAKSNKGEDAAKWLKAHPVKTVMGEKTWDAKGDLKVSDYVVYQW 364
            AY++++ +A G   AKS      A+ + A   KT  G+ ++DAKGDLK   +VVY+W
Sbjct: 306 PAYSAIEVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKDFKFVVYEW 363