Pairwise Alignments

Query, 343 a.a., small ribosomal subunit biogenesis GTPase RsgA from Pseudomonas fluorescens SBW25

Subject, 350 a.a., small ribosomal subunit biogenesis GTPase RsgA from Escherichia coli ECRC99

 Score =  297 bits (761), Expect = 2e-85
 Identities = 152/347 (43%), Positives = 230/347 (66%), Gaps = 16/347 (4%)

Query: 1   MAKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQTGLVIAHFGVQVEVE 60
           ++K +L++ Q  R+     +R  + +K +    + L     G    G+VI+ FG+  +VE
Sbjct: 1   LSKNKLSKGQQRRVNA-NHQRRLKTSKEKPDYDDNL----FGEPDEGIVISRFGMHADVE 55

Query: 61  ALEGELAGSVSRCHLRANLPALVTGDKVVWRAGN---QGI---GVIVAQLPRTTELRRPD 114
           + +G+    V RC++R  + +LVTGD+VVWR G    +G+   G++ A   RT+ L RPD
Sbjct: 56  SADGD----VHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPD 111

Query: 115 SRGQLKPVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLLLLNKFDLIDEQNAP 174
               +KP+AAN+D IVIV A LPE   N+IDRYLVA E   I P+++LNK DL+D++   
Sbjct: 112 FYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMA 171

Query: 175 ALNALLAVYRTLGYPVLEVSAHHGNGMEQLQQQLDGRISVFVGQSGVGKSSLVNSLLP-E 233
            +N  + +YR +GY VL VS+H  +G++ L++ L GRIS+F GQSGVGKSSL+N+LL  +
Sbjct: 172 FVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ 231

Query: 234 VDTRVGPLSELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRSDVEAGFIEFN 293
            +     +S+ SG G HTTT ARL+HFP GG++IDSPG+REFGL H+    +  GF+EF+
Sbjct: 232 KEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFH 291

Query: 294 DLIGTCRFRDCKHDREPGCALLKALEDGRVQQQRMNSYRSIIASLPE 340
           D +G C++RDCKHD +PGCA+ +A+E+G++ + R  +Y  I+ S+ +
Sbjct: 292 DYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQ 338