Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas fluorescens SBW25

Subject, 340 a.a., Flagellar motor rotation protein MotB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  130 bits (326), Expect = 6e-35
 Identities = 98/292 (33%), Positives = 142/292 (48%), Gaps = 31/292 (10%)

Query: 3   NNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKD 62
           +++ I+ +  +R     HGGAWK+AFADF  A+M  F+VLW+++    E+   ++G    
Sbjct: 5   DHETIVKRASRRHDDEAHGGAWKVAFADFVLALMCLFMVLWVLAARDKEE---LSGLMTA 61

Query: 63  PIGF--SESGTPFVIDLGGSPQLAPERTINP------------EVKTEAPQEKIPIERDT 108
             G   +E   P V  +GG      ER   P            +V    P+E  P +R  
Sbjct: 62  SGGHVVNEGRGPRVETVGGPRGSLIERFPMPARGSGGGPMAGEQVGEVQPRE--PGQRVR 119

Query: 109 VEAMAEQVEQERLELLLQELQTKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFD 168
            E+ A+  +   L  L+ E +  +  N Q +         +TP GLRI + D     MF 
Sbjct: 120 YESPAQLQDLAELLKLMSE-EAGLRANLQTI---------VTPYGLRIMLHDTDREGMFQ 169

Query: 169 SGSARLKPYFEDILLAMADTIKAVPNKISISGHTDAKPYAGQGDF--GNWELSANRANAA 226
            GSA     F+D+L  M      + N + I GHTDAKP+AG G     NW LS++RA AA
Sbjct: 170 LGSATPGTKFKDMLRRMGPLFAKIENSMLIVGHTDAKPFAGAGPHTASNWTLSSDRAAAA 229

Query: 227 RRALVAGSYPDPQVARVVGFASSQLFDHKDPFNPINRRIDIVVLTKKAQRAI 278
           R  L+ G  P   V +VVG A    F+  D    +NRRI+++VLT+    AI
Sbjct: 230 RAHLMDGGMPARNVLQVVGMADRAPFEAADAHASVNRRIELLVLTEGQSGAI 281