Pairwise Alignments

Query, 339 a.a., flagellar motor protein MotB from Pseudomonas fluorescens SBW25

Subject, 357 a.a., Flagellar motor rotation protein MotB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  239 bits (610), Expect = 8e-68
 Identities = 140/326 (42%), Positives = 189/326 (57%), Gaps = 23/326 (7%)

Query: 5   QPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKDPI 64
           QPIIIKR+K+     HGGAWKIA+ADF TAMMAFFL++WL+ +    +   IA YF+ P+
Sbjct: 9   QPIIIKRIKKGGHAAHGGAWKIAYADFVTAMMAFFLLMWLLGSTAKGELQGIASYFQSPV 68

Query: 65  GFSESGTPFVIDLGGSPQLAP------ERTINPEVKTEAPQEKIPIERDTVEAMAEQVEQ 118
             S  G P     G S  + P       ++       EA +    I      A + + + 
Sbjct: 69  KVSLMGGP---GTGNSSSILPGGGRDLSKSFGQMDSGEAERAAKLIGAQMARADSMRRDA 125

Query: 119 ERLELLLQELQTKVEENPQLLKFKDQISFEITPDGLRIQITDAANRPMFDSGSARLKPYF 178
            R++ L +++ T +E+NP+L +F  QI  E T DGL IQI D  NRPMFD+GSA +KPY 
Sbjct: 126 ARIDALERKITTLIEKNPKLSEFGSQIQLEKTLDGLHIQIVDQQNRPMFDTGSALVKPYM 185

Query: 179 EDILLAMADTIKAVPNKISISGHTDAKPY-AGQGDFGNWELSANRANAARRALVAGSYPD 237
            DIL  +   +  V N+I+++GHTDA PY +G+  + NWELSA+RANA+RR LVAG  P 
Sbjct: 186 RDILREIGAALGDVENRIALAGHTDATPYGSGERGYSNWELSADRANASRRELVAGGLPQ 245

Query: 238 PQVARVVGFASSQLFDHKDPFNPINRRIDIVVLTKKAQ---------RAIEGDQQPAPPP 288
            ++ RV G ASS+L     P +PINRRI IVV+T++A+         R +    +PAPPP
Sbjct: 246 DKLRRVEGLASSRLLREDLPTDPINRRISIVVMTQEAEDRLLPRSSPRPVMPMLEPAPPP 305

Query: 289 TPGAGAPGEVPTDPNAIPPGQEPLPA 314
            P A A       P A P    P PA
Sbjct: 306 VPTAAA----TRAPAARPAAAHPAPA 327