Pairwise Alignments

Query, 283 a.a., flagellar motor stator protein MotA from Pseudomonas fluorescens SBW25

Subject, 295 a.a., Motility protein A from Azospirillum sp. SherDot2

 Score =  210 bits (535), Expect = 3e-59
 Identities = 114/280 (40%), Positives = 167/280 (59%), Gaps = 2/280 (0%)

Query: 1   MAKIIGIIVVIASVLGGYVLSHGKIAALIQPFEVLIIGGAAFGAFLQANPGYMTMHVVKK 60
           M  + G+I V ASVLGG+    G++A L QP E++II GA  G F  AN   +    ++ 
Sbjct: 1   MRLMFGLIAVFASVLGGFYAMGGRMAVLWQPVEIVIIIGAGIGGFAIANSPAVLRDTLRA 60

Query: 61  SLGMFGSRFT-HTFYLEVLGLVYEILNKSRREGMMAIEGDIEDAAASPIFAKYPAVLKDE 119
              +   R T    YL+++ LVY +L  ++ +GM  IE DI+  A SP+F +YP VL+ +
Sbjct: 61  VGTIARGRTTPKNDYLDMIALVYGLLRVAKSKGMSQIEADIDKPADSPLFTQYPNVLRYD 120

Query: 120 RMTAYICDYLRIMSSGNMAPHELEGLFDMELFSLKEELEHPSHAVTGIADGMPGFGIVAA 179
           R   ++CDYLR+++ G   PH+LE L   EL +L  EL     A+  +AD +P  GIVAA
Sbjct: 121 RCITFLCDYLRLIALGQDNPHDLESLMAEELDTLGRELNQVPKALQNLADALPALGIVAA 180

Query: 180 VLGIVVTMASLGEGDQAAIGMHVGAALVGTFFGILAAYGFFGPLATSLAHDAKEEINLYE 239
           VLG++  M ++ E  +  +G  +G AL GTF G+L +YG  GP+A++     + E+N+Y 
Sbjct: 181 VLGVINAMGAISEAPE-VLGRMIGGALTGTFLGVLLSYGMVGPIASAARQRRESELNMYF 239

Query: 240 SIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQA 279
            IKA+L A   G PP +  E+ RKVLY   +PS AE+E A
Sbjct: 240 CIKAALCAYLRGSPPQVCAEYARKVLYTDIQPSLAEVEVA 279