Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas fluorescens SBW25

Subject, 840 a.a., primosomal protein N' from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  372 bits (955), Expect = e-107
 Identities = 212/545 (38%), Positives = 308/545 (56%), Gaps = 14/545 (2%)

Query: 200 ELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYLQLIRETLQAGKQALVLIPEI 259
           E+ L   Q     +I+  FD     LL G+TGSGKTE+Y+ LIRE L +G Q L+L+PEI
Sbjct: 300 EIKLADFQEEGLSSIKEQFDQKQTVLLHGITGSGKTEIYIHLIREVLDSGSQVLLLLPEI 359

Query: 260 NLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGDADIIIGTRSALFTPMKNPG 319
            L  Q ++R ++ F + + + HS  +D ER+E W     G    ++G RSA+F P  + G
Sbjct: 360 ALTTQIVSRLQKVFGSEMGIYHSKHSDNERVEVWQGVLSGRFSFVVGVRSAIFLPFDSLG 419

Query: 320 LIIIDEEHDGSYKQQEGL-RYHARDLALVRARQEDIPIVLGSATPSLESLHNAYTGRYGL 378
           +II+DEEH+ SYKQ +   R+ ARD A++ +       +LGSATPS ES +NA T +YG 
Sbjct: 420 MIIVDEEHEPSYKQFDPAPRFQARDAAIMLSWLHQSKTLLGSATPSYESFYNARTQKYGY 479

Query: 379 LRLNERAGGAKQPRF----LRLDVKSRPLDSGISGPMQQAIGQTLAAGQQVLVFLNRRGF 434
           + L++R G A+ P F    + +D K   L    +  M++ I + L   +Q+L+F NRRG+
Sbjct: 480 VHLSKRFGEAQLPEFHVADILVDKKKNLLKLDFTRIMREKIQEALDRQEQILIFQNRRGY 539

Query: 435 APTLLCHDCGWMSECERCDARMTVHQRHGELRCHHCGHVERVPRHCPQCGKVDLRPVGAG 494
           AP + C +CGW+ ECE CD  +T HQ   E+RCH+CG  E+VPR CP CG   L  VG G
Sbjct: 540 APYMSCEECGWIPECEHCDVNLTYHQYSEEMRCHYCGFKEKVPRACPACGSHKLTTVGIG 599

Query: 495 TERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCILIGTQMLAKGHHFPR 554
           TER EE L +LFP+  V R+D D+T  K A  ++F     G   IL+GTQM+ KG  F R
Sbjct: 600 TERLEESLSLLFPEARVGRMDLDTTRSKYAYQRIFDEFSSGNLDILVGTQMITKGLDFDR 659

Query: 555 VTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVIIQTHLADHPLLIQLT 614
           VT+V I+DAD  L+  DFR+ ER  Q I QVAGRAGR    G V+IQT   DH +  ++ 
Sbjct: 660 VTVVGIVDADRILYFPDFRSGERAFQQITQVAGRAGRRNRRGNVVIQTRRPDHEVFEKVI 719

Query: 615 EQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQAESFLDEACSAAERLLGELGLS 674
           +  +  F    ++ER+    PPF     + +  HK  +     ++A      LL ++ + 
Sbjct: 720 QGNFSEFYLTEMAERKRFFYPPFVKNVKITSR-HKEAKV---AEKAAINLANLLKDIPVK 775

Query: 675 GIELLGPVPAPMERRAGRYRAQLLLQ----ATSRAPLHRLLSSWLLALEQMPSGRQVRWS 730
            I +LGP  A + +   +Y   + ++      + A     +   L  L    + + VR+ 
Sbjct: 776 KI-ILGPERALIGKIKNQYLFDIYIKLDRAGNTPAIFKHEMGKILFELNTQKAFKSVRFV 834

Query: 731 LDVDP 735
           +DVDP
Sbjct: 835 VDVDP 839



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 5/106 (4%)

Query: 2   PDAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRVPFGRREMI-GILVEIADHSEVP 60
           P     + LP P+ R+F YR P   +   +  G RV V FGR++++ GI+ ++  H + P
Sbjct: 17  PSTFADVILPVPIPRMFTYRIPR-TMEKSIGIGHRVIVQFGRKKVLTGIIGKV--HQKPP 73

Query: 61  AE-KLKPALAILDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALP 105
            + + K  L +LD  P + P   K   W A+YY   +G+ ++ ALP
Sbjct: 74  KDYETKAILEVLDDQPVVNPLQIKFWFWMAEYYCCQIGEVMNAALP 119