Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas fluorescens SBW25

Subject, 732 a.a., Primosome factor n from Escherichia coli BL21

 Score =  687 bits (1774), Expect = 0.0
 Identities = 367/738 (49%), Positives = 484/738 (65%), Gaps = 14/738 (1%)

Query: 5   ILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRVRVPFGRR-EMIGILVEIADHSEVPAEK 63
           +  +ALP PL R FDY  P G+    ++ G RVRVPFG++ E IGI+V ++D SE+P  +
Sbjct: 3   VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59

Query: 64  LKPALAILDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQERFW- 122
           LK  + +LD+ P    ++++L LW A YY H +GD L  ALP+LLRQG  A      +W 
Sbjct: 60  LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119

Query: 123 SMVPGARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGMVQVE 182
           +   G  +D   + R+P+Q++ALA L Q    +    ++ L  +  +L  L  KG+   +
Sbjct: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLC--D 175

Query: 183 IRKHAP---DARHEHWLAQPELPLNPEQRAAYEAIRAGFDSFHAFLLAGVTGSGKTEVYL 239
           +    P   D R  + ++   L LN EQ  A  AI +  D+F A+LLAGVTGSGKTEVYL
Sbjct: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235

Query: 240 QLIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDG 299
            ++   L  GKQALV++PEI L PQT+ARF +RFNA + ++HS +ND ERL +WL A++G
Sbjct: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295

Query: 300 DADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQEDIPIVLG 359
           +A I+IGTRSALFTP KN G+I+IDEEHD SYKQQEG RYHARDLA+ RA  E IPI+LG
Sbjct: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355

Query: 360 SATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTL 419
           SATP+LE+L N    +Y LLRL  RAG A+      LD+K + + +G++  +   + Q L
Sbjct: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415

Query: 420 AAGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRHGELRCHHCGHVERVPRH 479
            A  QV++FLNRRGFAP LLCHDCGW++EC RCD   T+HQ    LRCHHC     VPR 
Sbjct: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475

Query: 480 CPQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCI 539
           CP CG   L PVG GTE+ E+ L  LFP  P+ R+DRD+TSRK A+ Q  A + +G   I
Sbjct: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535

Query: 540 LIGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGRVI 599
           LIGTQMLAKGHHFP VTLV++LD DG LFS DFR++ER AQL  QVAGRAGRA + G V+
Sbjct: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595

Query: 600 IQTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQAESFLDE 659
           +QTH  +HPLL  L  +GY AFAEQAL+ERR   LPP++   ++RAE H    A  FL +
Sbjct: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655

Query: 660 ACSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSSWLLALE 719
             +    L   L    + +LGPVPA   +R GR+R Q+LLQ  SR  L  +++  L  + 
Sbjct: 656 LRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713

Query: 720 QMPSGRQVRWSLDVDPVD 737
            +P  R+V+W LDVDP++
Sbjct: 714 TIPDSRKVKWVLDVDPIE 731