Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  822 bits (2122), Expect = 0.0
 Identities = 478/952 (50%), Positives = 609/952 (63%), Gaps = 55/952 (5%)

Query: 7   VLVDGSSYLYRAFHA--------LPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVV 58
           +LVDGSSYLYRAF A        LP  T  K   TGA++ ++NM++ LRK       A V
Sbjct: 1   LLVDGSSYLYRAFFAGGEAMSTTLPDGTVLK---TGAIRIMINMMQKLRKDVRADYAACV 57

Query: 59  FDAKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTL 118
           FDAKG TFRD +Y EYKANR  MPDD+R QI P+H+ V  LG+ +L V GVEADDVIGTL
Sbjct: 58  FDAKGPTFRDALYPEYKANRSPMPDDLRAQIAPIHEVVKLLGWKVLDVPGVEADDVIGTL 117

Query: 119 ARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLA 178
           A  +A      +IS+GDKD++QLV+ HIT+++TM     D+ GV  +FGV P  ++DY  
Sbjct: 118 AHLAAQQGIDCIISSGDKDLSQLVNEHITVIDTMNDRRRDVAGVTAEFGVPPSLMLDYQT 177

Query: 179 LMGDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHK 238
           L+GD  DN+PGVP +GPKTA   L    G L+ L  +        I+GA      L    
Sbjct: 178 LVGDQVDNVPGVPKVGPKTAVKWLQEY-GSLEALVARAG-----EIKGAAG--ENLRNAL 229

Query: 239 EMAFLSYQLATIKIDVPLDVGLDDLHLIEP------DREKLLELYTLLEFKSWFDEI-QR 291
           +      +L TIKID  L   ++ L  +E       D E L        FK     + Q 
Sbjct: 230 DWLPKGRELLTIKIDCDLQDHIEGLPSLEAITIAGQDSEALKAFGETYGFKGLVKSLTQH 289

Query: 292 DA--KRVE---LKAA---------PVVEDVAEVAAPAEAT----YTTILDQATFDIWLKK 333
           D   +R+E   +KAA         P + D  +++  AE T    Y T+L    FD WL++
Sbjct: 290 DVPPERIEESKVKAAAKGKAGDGSPGLFDEPDLSGSAERTTNLRYDTLLTWDQFDSWLQR 349

Query: 334 LNDAKLFAFDTETTGIDAQQAQLVGVSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLAL 393
           L  A+L A DTETT +D  +A++VG+SF+V P EAAYIPL HA   APEQL  D VL  L
Sbjct: 350 LQAAELVALDTETTSLDEMRAEIVGISFSVTPGEAAYIPLRHAGPEAPEQLPFDEVLAKL 409

Query: 394 KPLLEDPTKLKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNATATRHD 453
           KP LEDP K K+GQH K+D ++ AN        HGI V+G   DTML+SYVL      H 
Sbjct: 410 KPWLEDPAKHKLGQHMKYDRHVFAN--------HGIEVQGYVHDTMLQSYVLEVHKP-HG 460

Query: 454 MDSLAKKYLDYDTVAFQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQALFAQLS 513
           + SLA+++L    + ++D+ GKGA Q+ F Q+ + +A  Y+ ED+D TL +H+ L+ QL 
Sbjct: 461 LASLAERHLGRQGINYEDLCGKGAHQIPFAQVEVAKAAEYSCEDSDQTLDVHRVLWPQLQ 520

Query: 514 AIPSLASVLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEE 573
           A   L  +  ++EI     L RIER G L+D   L  QS ELG ++V LE++A+ IAG+ 
Sbjct: 521 ADEKLRFIY-ELEIASSEALYRIERNGVLIDAPTLAAQSHELGQRIVALEQEAYAIAGQP 579

Query: 574 FNLGSPKQLGAILYEKLGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKL 633
           FNLGSPKQLG I ++KLGLPV+KKT  G  ST EEVL KLAED YPLP  ++++RS++KL
Sbjct: 580 FNLGSPKQLGEIFFDKLGLPVIKKTATGARSTDEEVLEKLAED-YPLPAKILEHRSLAKL 638

Query: 634 KSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAP 693
           K TYTD+L +   PRTGR+HT Y QAVA TGRLSS+DPNLQNIP+RT EGRR+R+AF+AP
Sbjct: 639 KGTYTDKLAQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAP 698

Query: 694 KGYKMLAADYSQIELRIMAHLSKDEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQRRS 753
            G  + +ADYSQIELRIMAH+S DE L+ AF   LDVH ATAAEVF VE   V+S+QRR 
Sbjct: 699 AGSVIASADYSQIELRIMAHISGDEALLRAFHEGLDVHRATAAEVFGVETAQVSSEQRRY 758

Query: 754 AKAINFGLIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVE 813
           AK INFGLIYGMG+  L K +G+D   AK YI  YF R+ GV+ YM+ TR +A D GY+E
Sbjct: 759 AKVINFGLIYGMGSFGLAKALGIDNTAAKNYITRYFERFEGVKRYMDETRQRAKDMGYIE 818

Query: 814 TFFGRRLYLPDIHSNKPQERAAAERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLDAKV 873
           T FGRRL LPDI + K  + +A ER AINAPMQGTAAD+IK +MV V   L +     K+
Sbjct: 819 TVFGRRLVLPDIKNAKGAKLSALERQAINAPMQGTAADLIKLSMVAVQKALDEQRRSTKM 878

Query: 874 ILQVHDELVLEVREDLVAEVSEKIREYMSAAAQLDVPLLVEVGVGDNWDQAH 925
           I+QVHDELV EV E  V  +  +I   M+  A L VPLL EVGVG NWD+AH
Sbjct: 879 IMQVHDELVFEVPEGEVDWLKTEIPHLMAGVAALKVPLLAEVGVGPNWDKAH 930