Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 937 a.a., DNA polymerase I from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  641 bits (1654), Expect = 0.0
 Identities = 392/955 (41%), Positives = 557/955 (58%), Gaps = 61/955 (6%)

Query: 6   LVLVDGSSYLYRAFHALP--PLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAKG 63
           L L+D  + +YRA  A    P   SKGL TG + G  N L  + ++   S  AV FD   
Sbjct: 9   LFLLDAMALIYRAHFAFSKNPRINSKGLNTGIMLGFTNTLLEVIEKQSPSHIAVAFDTAA 68

Query: 64  GTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSSA 123
            TFR + +  YKANR   P+D+ + I  + Q V     P+L ++G EADD+IGT+A+ + 
Sbjct: 69  PTFRHEQFEAYKANRQEQPEDITVGIPWVKQIVDGFNIPILELDGYEADDIIGTIAKKAE 128

Query: 124 AADRPVVISTGDKDMAQLVDGHITLVN-TMTGSAMDIEGVKE---KFGVA-PEQIIDYLA 178
             D  V + T DKD  QLV+ HI L      G+A+D+ G KE   K+ +  P+Q+ D L 
Sbjct: 129 YKDFEVYMMTPDKDYGQLVEEHIFLYKPAFMGNAVDVMGPKEVCAKWEIEDPDQVRDILG 188

Query: 179 LMGDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHK 238
           LMGD+ DNIPG+PGIG KTA  LL    G ++ L E +       ++G +     +E   
Sbjct: 189 LMGDAVDNIPGIPGIGEKTAKKLLKAY-GTIEGLLEHVG-----DLKGKQK--ENVENFG 240

Query: 239 EMAFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEI--------- 289
           +   LS  LATIK DVP++   +DL    PD EKL  L+  +EF++    +         
Sbjct: 241 QQGLLSKSLATIKQDVPIEFNPEDLTYDGPDEEKLKALFAEMEFRTLTQRVFGEKMKKPA 300

Query: 290 -------------QRDAKRVELKAA---PVVEDVAEVAAPAEATYTTILDQATFDIWLKK 333
                          DA+  E++ A   PV + +A V +   A Y  +   A     ++ 
Sbjct: 301 VKVNEQLGLFTGPAEDAEEEEVEEANPIPVPDQLATVTSMVHA-YHKVEGLAAIKELVEY 359

Query: 334 LNDAKLFAFDTETTGIDAQQAQLVGVSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLAL 393
           L     F FDTETT +D  +A+LVG+SFA  P EA YIP+        +Q +   +L  L
Sbjct: 360 LEIQDEFCFDTETTDLDPNKAELVGLSFAYVPGEAFYIPVP------ADQEETKKLLEPL 413

Query: 394 KPLLEDPTKLKVGQHAKFDMNILANCAIGGDPAHGITVRGIAFDTMLESYVLNATATRHD 453
           + + ED +  K+GQ+ K+D  +L N        +GI ++G  +DTML  Y++     +H+
Sbjct: 414 RGVFEDESITKIGQNIKYDALVLKN--------YGIALKGKLYDTMLAHYLIEPEG-KHN 464

Query: 454 MDSLAKKYLDYDTVAFQDIAGK-GAKQLTFDQIALEQAGPYAAEDADVTLRLHQALFAQL 512
           MD LA+ YL Y  V+ + + GK G  Q       +++   YA+EDAD+TL+L Q L   L
Sbjct: 465 MDWLAEHYLQYRPVSIETLIGKKGKSQGNMRDADVDKVVEYASEDADITLQLAQKLNPDL 524

Query: 513 SAIPSLASVLTDIEIPLVPVLARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGE 572
                L  +  ++E PL+PVL  +E +G  +DK+ L   S  L   + E+E + +++AG 
Sbjct: 525 KE-RGLEKLFYEVETPLIPVLTAMEYEGVKIDKESLAELSTALEKDITEIEARVYDLAGV 583

Query: 573 EFNLGSPKQLGAILYEKLGL-PVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMS 631
           +FNL SPKQLG +L+ K+ L P  KKT  GQ +T EEVL+KLA   + + + ++ YR + 
Sbjct: 584 KFNLASPKQLGEVLFVKMELDPKAKKTKTGQYATGEEVLSKLAPK-HEIARAILDYRELV 642

Query: 632 KLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFI 691
           KLK+TY D LP  INP+T RIHT+Y+Q VAATGRLSS +PNLQNIP+RT  GR IR+AF+
Sbjct: 643 KLKNTYVDTLPTLINPKTDRIHTTYNQVVAATGRLSSINPNLQNIPIRTERGREIRKAFV 702

Query: 692 A-PKGYKMLAADYSQIELRIMAHLSKDEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQ 750
              + + +LAADYSQIELRIMA  SKDE +M AFR   D+H+ TAA++F+V L +VTS+ 
Sbjct: 703 PRDEAHVILAADYSQIELRIMAAFSKDESMMEAFREGRDIHSTTAAKIFQVPLEEVTSEM 762

Query: 751 RRSAKAINFGLIYGMGAQKLGKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQG 810
           RR AK  NFG+IYG+ A  L + + +    AK  ID YF  +P V +YM     +A    
Sbjct: 763 RRKAKTANFGIIYGISAFGLSQRLNIPRGEAKEIIDAYFKEFPAVSQYMNDCIEKARKNE 822

Query: 811 YVETFFGRRLYLPDIHSNKPQERAAAERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLD 870
           YVET  GRR YL DI+S     R  +ER AINAP+QG+AAD+IK AM+ V  W+ +  L 
Sbjct: 823 YVETILGRRRYLRDINSRNATMRGYSERNAINAPIQGSAADMIKVAMIHVHQWMLEKQLK 882

Query: 871 AKVILQVHDELVLEVREDLVAEVSEKIREYMSAAAQLDVPLLVEVGVGDNWDQAH 925
           +K+ILQVHDELV +  +D V  + ++I + M+ A +++VP+ VEVGVG +W +AH
Sbjct: 883 SKMILQVHDELVFDAHKDEVDLLKKEIPKLMTKALEIEVPMQVEVGVGKDWLEAH 937