Pairwise Alignments

Query, 925 a.a., DNA polymerase I from Pseudomonas fluorescens SBW25

Subject, 928 a.a., 5 from Escherichia coli BL21

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 565/933 (60%), Positives = 690/933 (73%), Gaps = 20/933 (2%)

Query: 3   QAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFDAK 62
           Q PL+LVDGSSYLYRA+HA PPLT S G PTGA+ GVLNML+SL  QY  +  AVVFDAK
Sbjct: 6   QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65

Query: 63  GGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLARSS 122
           G TFRD+++  YK++RP MPDD+R QIEPLH  V A+G PLL V GVEADDVIGTLAR +
Sbjct: 66  GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125

Query: 123 AAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALMGD 182
             A RPV+ISTGDKDMAQLV  +ITL+NTMT + +  E V  K+GV PE IID+LALMGD
Sbjct: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185

Query: 183 SSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEMAF 242
           SSDNIPGVPG+G KTA  LL G+ GGL  LY + + +  L  RGAKT+ AKLE++KE+A+
Sbjct: 186 SSDNIPGVPGVGEKTAQALLQGL-GGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244

Query: 243 LSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQR----DAKRVEL 298
           LSYQLATIK DV L++  + L + +P  E+LL L+   EFK W  +++      AK  + 
Sbjct: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304

Query: 299 KAAPVVEDVAEVAAPAEAT------YTTILDQATFDIWLKKLNDAKLFAFDTETTGIDAQ 352
            A P    VA+ A    AT      Y TILD+ T   W+ KL  A +FAFDTET  +D  
Sbjct: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364

Query: 353 QAQLVGVSFAVQPHEAAYIPLTHAYIGAPEQLDRDTVLLALKPLLEDPTKLKVGQHAKFD 412
            A LVG+SFA++P  AAYIP+ H Y+ AP+Q+ R+  L  LKPLLED   LKVGQ+ K+D
Sbjct: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424

Query: 413 MNILANCAIGGDPAHGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDYDTVAFQDI 472
             ILAN        +GI +RGIAFDTMLESY+LN+ A RHDMDSLA+++L + T+ F++I
Sbjct: 425 RGILAN--------YGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEI 476

Query: 473 AGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQALFAQLSAIPSLASVLTDIEIPLVPV 532
           AGKG  QLTF+QIALE+AG YAAEDADVTL+LH  ++  L       +V  +IE+PLVPV
Sbjct: 477 AGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPV 536

Query: 533 LARIERQGALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGL 592
           L+RIER G  +D  +L   S EL  ++ ELE++A EIAGEEFNL S KQL  IL+EK G+
Sbjct: 537 LSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGI 596

Query: 593 PVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRI 652
             LKKT  G  ST+EEVL +LA D YPLPKV+++YR ++KLKSTYTD+LP  INP+TGR+
Sbjct: 597 KPLKKTPGGAPSTSEEVLEELALD-YPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRV 655

Query: 653 HTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPKGYKMLAADYSQIELRIMA 712
           HTSYHQAV ATGRLSS+DPNLQNIPVR  EGRRIRQAFIAP+ Y +++ADYSQIELRIMA
Sbjct: 656 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMA 715

Query: 713 HLSKDEGLMNAFRHNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGK 772
           HLS+D+GL+ AF    D+H ATAAEVF + L  VTS+QRRSAKAINFGLIYGM A  L +
Sbjct: 716 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLAR 775

Query: 773 DIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVETFFGRRLYLPDIHSNKPQE 832
            + +  K A+ Y+D+YF RYPGV EYMERTRAQA +QGYVET  GRRLYLPDI S+    
Sbjct: 776 QLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGAR 835

Query: 833 RAAAERTAINAPMQGTAADIIKKAMVLVDNWLTDSGLDAKVILQVHDELVLEVREDLVAE 892
           RAAAER AINAPMQGTAADIIK+AM+ VD WL       ++I+QVHDELV EV +D V  
Sbjct: 836 RAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDA 895

Query: 893 VSEKIREYMSAAAQLDVPLLVEVGVGDNWDQAH 925
           V+++I + M    +LDVPLLVEVG G+NWDQAH
Sbjct: 896 VAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928