Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 413 a.a., Efflux transporter RND family, MFP subunit from Pseudomonas putida KT2440

 Score =  300 bits (769), Expect = 4e-86
 Identities = 177/393 (45%), Positives = 240/393 (61%), Gaps = 20/393 (5%)

Query: 3   VKLKRLSVAVSAVAVLGAAAGAGLVRGVGPGAVADARAADAPAPAVEVDVATVLSRTVTD 62
           +K  R  +A  AV V+ A        G  P AV       APA A +V VA V+ + +T+
Sbjct: 5   LKPLRFPLAALAVVVISAC-------GRTPDAV------QAPA-APKVSVAKVIEQPITE 50

Query: 63  WQSYSGRLEAVDHVDVRPLVSGTIVAIHFTDGALVKKGEPLFSIDPRPYQAEVDRAAAQV 122
           W  ++GRLEA + V+VRP VSG I  + FT+GA VKKG+ LF IDPRP+QAEV R  AQ+
Sbjct: 51  WDEFTGRLEAPETVEVRPRVSGQIDQVAFTEGAQVKKGDLLFQIDPRPFQAEVRRLEAQL 110

Query: 123 AAAKARALYTSTDAARAERLLVDNAIAKRDYDEKQNAAREASAAVKAADAAFEAAQVSLG 182
             AKA A+ ++ +A R ERL   NAI+    + + +AA EA A V A  A  + A+++L 
Sbjct: 111 QQAKATAIRSANEARRGERLRDSNAISAELAESRSSAAAEARAGVDAIQAQLDLARLNLS 170

Query: 183 YTTITAPVSGRVSRAELTVGNVVSAGANAPLLTTLVSVSPIYASFDVDEQTYLRY--LGR 240
           +T +TAP+SGRVSRAE T GN+V+A      LT++VS   +YA FD DE+ YL+Y  L R
Sbjct: 171 FTRVTAPISGRVSRAEFTAGNIVTADVTP--LTSVVSTDKVYAYFDADERVYLKYTQLAR 228

Query: 241 D--RQAKVPVALGLANEDGYSRKGTISSVDNRLDTQSATIRVRATIDNRDGALVPGLYAR 298
           +  R    PV LGL NE G    G ++ VDN+++ ++ TIR RA  DN +G   PGLYAR
Sbjct: 229 EGQRSQSTPVYLGLTNESGNPHLGQMNFVDNQVNPRTGTIRGRAVFDNSNGQFTPGLYAR 288

Query: 299 VKVGGGDAHPAVLIDDAAIGTDQSKKYVLVVNDVNKVQYREVQLGALHDNLRVIDAGLKP 358
           +K+ G   + A+LI+D A+GTD  KK+VLV++  NK  YR V+LG   + LR++ +GL  
Sbjct: 289 LKLVGSAQYDAMLINDEAVGTDLGKKFVLVMDKDNKATYRAVELGPKLEGLRIVRSGLGK 348

Query: 359 GERIVVNGLMRARPNDTVKPHPVDMTDAARSAA 391
            +RIVV GL R RP   V P    M      AA
Sbjct: 349 DDRIVVKGLQRVRPGSPVTPEETQMASEQTLAA 381