Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 385 a.a., anaerobic multidrug efflux transporter, ArcA-regulated from Escherichia coli BL21

 Score =  172 bits (435), Expect = 2e-47
 Identities = 109/347 (31%), Positives = 173/347 (49%), Gaps = 9/347 (2%)

Query: 34  AVADARAADAPAPAVEVDVATVLSRTVTDWQSYSGRLEAVDHVDVRPLVSGTIVAIHFTD 93
           A  D  A +A A   EV V T+   +V       GR    +  ++RP V G I+  +F +
Sbjct: 20  ACDDKSAENAAAMTPEVGVVTLSPGSVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIE 79

Query: 94  GALVKKGEPLFSIDPRPYQAEVDRAAAQVAAAKARALYTSTDAARAERLLVDNAIAKRDY 153
           G  V +G+ L+ IDP P QAE++ A   +A A + A        R   LL  N ++++DY
Sbjct: 80  GDKVNQGDSLYQIDPAPLQAELNSAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDY 139

Query: 154 DEKQNAAREASAAVKAADAAFEAAQVSLGYTTITAPVSGRVSRAELTVGNVVSAGANAPL 213
           D  +    EA A V  A AA E A ++L Y  +T+P++G   ++ +TVG +V+A   A  
Sbjct: 140 DTARTQLNEAEANVTVAKAAVEQATINLQYANVTSPITGVSGKSSVTVGALVTAN-QADS 198

Query: 214 LTTLVSVSPIYASFDVDEQTYLRYLG-------RDRQAKVPVALGLANEDGYSRKGTISS 266
           L T+  + PIY       Q +LR          +  Q   PV L L N   YS+ GT+  
Sbjct: 199 LVTVQRLDPIYVDLTQSVQDFLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKF 258

Query: 267 VDNRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGGDAHPAVLIDDAAIGTD-QSKKY 325
            D  +D  + ++ +RA   N +G L+PG+Y    V  G     +L+    +  + Q K  
Sbjct: 259 SDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKAT 318

Query: 326 VLVVNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVVNGLMRARP 372
            L+++  + VQ RE++      +  V+ +GL+ G+R++V+GL R RP
Sbjct: 319 ALILDKDDVVQLREIEASKAIGDQWVVTSGLQAGDRVIVSGLQRIRP 365