Pairwise Alignments

Query, 391 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

Subject, 396 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  323 bits (828), Expect = 5e-93
 Identities = 178/384 (46%), Positives = 242/384 (63%), Gaps = 17/384 (4%)

Query: 22  AGAGLVRGVGPGAV-------ADARAADAPA--PAVEVDVATVLSRTVTDWQSYSGRLEA 72
           AG GL   V  GA+        +A AA  PA  PA+ V VA V SR V  W+ +SGRLEA
Sbjct: 13  AGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDVMRWEEFSGRLEA 72

Query: 73  VDHVDVRPLVSGTIVAIHFTDGALVKKGEPLFSIDPRPYQAEVDRAAAQVAAAKARALYT 132
           VD V +R  V+G I A+HF +GALVK+G+PLF+IDP PYQA V  A  QVA+A+A+    
Sbjct: 73  VDRVQIRSRVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEGQVASAEAKVSLA 132

Query: 133 STDAARAERLLVDNAIAKRDYDEKQNAAREASAAVKAADAAFEAAQVSLGYTTITAPVSG 192
            T+  R  RL  +  I++ D D++Q++  +A A ++AA AA   AQ+ LGYT I APVSG
Sbjct: 133 KTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAARAALTTAQLDLGYTEIIAPVSG 192

Query: 193 RVSRAELTVGNVVSAGANAPLLTTLVSVSPIYASFDVDEQTYLRYLGR--------DRQA 244
           RV R E+T GN+V+AG+ +P LTTLVSV+PIYASF+  E    + L              
Sbjct: 193 RVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAELPKTDGALPALE 252

Query: 245 KVPVALGLANEDGYSRKGTISSVDNRLDTQSATIRVRATIDNRDGALVPGLYARVKVGGG 304
           ++PV +G  +++G   KGT+  +DN++D+ S TI VRA  DN DG L+PG + RV++G  
Sbjct: 253 QIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLIPGQFVRVRMGEP 312

Query: 305 DAHPAVLIDDAAIGTDQSKKYVLVVNDVNKVQYREVQLGALHDNLRVIDAGLKPGERIVV 364
                ++I D AIGTDQ K++V VV+  NKV YR+++ GA  D  R+ID+GL  G+ IVV
Sbjct: 313 KPENRIVISDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRIIDSGLAAGDTIVV 372

Query: 365 NGLMRARPNDTVKPHPVDMTDAAR 388
           NGL R RP  T+ P   D   A++
Sbjct: 373 NGLQRIRPGATIAPQAEDKVAASQ 396