Pairwise Alignments

Query, 908 a.a., type VI secretion system ATPase TssH from Paraburkholderia sabiae LMG 24235

Subject, 810 a.a., ATPase AAA from Pseudomonas simiae WCS417

 Score =  568 bits (1465), Expect = e-166
 Identities = 352/878 (40%), Positives = 481/878 (54%), Gaps = 80/878 (9%)

Query: 1   MTISRQALFGKLGATLFRSIESATTFCKLRGNPYVELVHWLHQLIQLPDSDLHRIVRHAG 60
           M +  Q L   L A   R +  A   C  RG   V +   L  L++  D  L R +  AG
Sbjct: 2   MNVDLQQLIQTLTAQARRDLVRAAERCLTRGGREVLVEDLLLALLEHQDGLLVRAMADAG 61

Query: 61  IEQDTLERDLARALAALPAGASSISD---FSHHIELAIERAWVLATLEFGDRRV-RGAWL 116
           IE   L+  L       P G +S S    F+  +   +++A ++A +E     V  GA L
Sbjct: 62  IEAGELQATLQ------PKGEASASRNPVFALALVQWLQQALMVAHVELRQAEVDHGALL 115

Query: 117 IAALAGTPELRRILLSISPAFGRIPATGMGEALTAWIEGSPESADMPYDNSDFSPAVPGE 176
           +A L                  R P    G A    +           D       V G+
Sbjct: 116 LALL------------------RHPLQYAGSAYQVLLSR--------LDVQRVHGFVLGQ 149

Query: 177 ASQAVQVAGKGSLLDQYCTDMTARARAGEIDTVTGRGAEIRVMSDILQRRRQNNPLLTGE 236
           A          SLL+++  D+T +AR G ID V  R AEI  + DIL RRR+NNP+L GE
Sbjct: 150 APCPGPAPTVDSLLERFTHDLTRQAREGRIDPVLCRDAEIGQLIDILMRRRKNNPILVGE 209

Query: 237 AGVGKTAVVEGLALAIAAGDVPPTLAGVRLMSLDVGALLAGASMKGEFESRLKGVLEAAV 296
           AGVGKTAVVEGLAL +    VP  L  VR+++LD+G L AGAS+KGEFE RLKGV++   
Sbjct: 210 AGVGKTAVVEGLALRVVTAQVPEPLRDVRVLTLDMGLLQAGASIKGEFERRLKGVIDEVN 269

Query: 297 KSSVPIILFVDEIHTLVGAGGQAGTGDAANLLKPALARGAVRMIGATTWSEYKRHIEKDP 356
            S  P+ILF+DE HTLVGAG QAG  DAANLLKPALARG +R I ATTWSEYK++ EKDP
Sbjct: 270 ASMKPVILFIDEAHTLVGAGAQAGASDAANLLKPALARGELRTIAATTWSEYKKYFEKDP 329

Query: 357 ALTRRFQVLQVPEPEEVAAIDMVRGLAAAFSKHHGVVILDEAIRAAVTLSHRYIPSRQLP 416
           AL RRFQ + V EP    A+ ++RGL + + + HGV + D+A+ AA  +S RY+  RQLP
Sbjct: 330 ALARRFQPVLVGEPSVEQAVSILRGLVSVYERSHGVYVRDDAVVAAAQMSARYLSGRQLP 389

Query: 417 DKAISLLDTACARVALSQHTPPRELQNVRQRLQAAHVERELLEQEARIGLDAD-KAMAAV 475
           DKA+ +LDTACAR+   + T P  LQ           + + + ++ + G   D + +  +
Sbjct: 390 DKAVDVLDTACARLRTRRDTAPEALQRFYAEQAEGVRQHQAISRDRQEGFPVDEQVLHGL 449

Query: 476 QARISTLSAQEGAIDARWQTQLAAARALARARAAVAAGDDDAPSLDTLRNLERMLCDLQG 535
             R+ T+ ++   ++  W  Q                                       
Sbjct: 450 NLRMETMESERQHLEQCWLEQ--------------------------------------- 470

Query: 536 DTPLVFPDVDAAIIAEIVSDWTGIPVGRMVTDEITAVRTLPETLGARVIGQSDALHQISE 595
             P     V   ++AE++S WTGIPV ++  +    V  L + L AR++GQ  A+  +  
Sbjct: 471 --PTSTQQVCPRLVAEVISGWTGIPVEQLAFEHSARVLGLADALRARILGQEHAVQALDR 528

Query: 596 RVQTARAGLADPKKPLGVFLLAGPSGVGKTETALALAEALYGGEQNLITINMSEYQEAHT 655
            ++   AGL     P+GVFLL GPSGVGKTETALAL + LYGGE+ + T+NMSE+QE H+
Sbjct: 529 NLRAVAAGLNKVDAPVGVFLLVGPSGVGKTETALALGDLLYGGERFVTTLNMSEFQEKHS 588

Query: 656 VSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHHDVHEMFFQVFDKGYMEDG 715
           +S L GAPPGYVG+GEGGVLTEAVR+RPYSVVLLDE+EKA  +V  +F+Q+FDKG   DG
Sbjct: 589 LSRLIGAPPGYVGFGEGGVLTEAVRQRPYSVVLLDEVEKADPEVLNLFYQIFDKGVANDG 648

Query: 716 DGRYIDFRNTTILLTSNAASELTASLCADATLAPDQDGLREALAPELLKTFPAAFMGRVT 775
           +GR IDFRNT IL+TSN  SE    LCA     P+   L+EA+ P L   F  A + R+ 
Sbjct: 649 EGREIDFRNTLILMTSNLGSECIGELCAGGQ-RPEMHVLQEAIRPLLRDHFKPALLARIR 707

Query: 776 VVPYRPLAHASLASIVRLHLNRVVRRMADGHDIALRYSERVVDYIVARCLVQETGARVLI 835
           VVPY P+    L  + RL L R+ +R++    +A  Y+  +V ++   C   ++GAR + 
Sbjct: 708 VVPYYPVTGEILNDLTRLKLERLGQRLS-LRKLAFSYTPGLVAHMAEHCSHGDSGARFID 766

Query: 836 GFIEQHILPRLSALWLDAFSSKRALTGIGVDIIDSDAP 873
            +IE H+LP++    L A +    LT +   +  +  P
Sbjct: 767 QWIELHLLPQVVDRLLRAMAQDEPLTHVHAYLAGNGMP 804