Pairwise Alignments

Query, 318 a.a., LysR substrate-binding domain-containing protein from Paraburkholderia sabiae LMG 24235

Subject, 307 a.a., transcriptional activator of dmlA from Escherichia coli BL21

 Score =  215 bits (547), Expect = 1e-60
 Identities = 113/294 (38%), Positives = 177/294 (60%), Gaps = 1/294 (0%)

Query: 2   NTDTASDFEFFILLAKLKSMSGAARALDLTPPAATKRLGIIEKRLGARLVNRTTRSVSLT 61
           N    +D   F+L+A+    +  A  L ++P   +KR+ ++E+ L   L++RTTR V++T
Sbjct: 3   NLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTIT 62

Query: 62  PEGETYLRYASQIVGQVREMEEAISGAKRDPQGLLRINATLGFGRTTIAPLVSDFAKRFP 121
            EGE    +A +I+  V +M + +S  ++ PQG+LRI ++ GFGR  +AP +S  AK +P
Sbjct: 63  EEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALSALAKAYP 122

Query: 122 NVEVQFEVTDRPVDLVEGAFDMAIRFGELPDSRLSARRIMSNRRFLCASPKYLERFGTPE 181
            +E++F+V DR VDLV    D+ IR G+     L AR++ +N R LCASP+++ + G P+
Sbjct: 123 QLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPK 182

Query: 182 RVDDLQQHRCIIHRQNDDAYGVWRYIVNDHIEAIKVKGALSSNDGDIVLRWALDGHGILI 241
            + DL    C++ ++ D  +GVW+    +   AIKV G LSSN G+IV +W LDG GI +
Sbjct: 183 HLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKVTGPLSSNHGEIVHQWCLDGQGIAL 242

Query: 242 RSEWDLAKYVQSGRLKLVLPNTVLPSADLFVYYSRQRNQTARARAFIDFLVDRF 295
           RS WD+++ + SG L  VLP    P+    VY SR    +A+ R  ++FL   F
Sbjct: 243 RSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLAT-SAKVRITVEFLRQYF 295