Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Paraburkholderia sabiae LMG 24235

Subject, 347 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 1e-29
 Identities = 100/354 (28%), Positives = 160/354 (45%), Gaps = 56/354 (15%)

Query: 4   AQRRIDP-GVVEQLLDEPHRFEFFQAVRLLEKWFGQEASQRPGDVVAQRMTFRTTLSLAF 62
           A+   DP   ++ +  EP  ++FFQA+R +E     E+   P            +L LA 
Sbjct: 5   ARTSSDPVSTLDAMHQEPWEYDFFQALRRIEC----ESPDLP--------RLGHSLRLAD 52

Query: 63  PPSEIQGAVSYDEEGGALNDKAQRTAALADDAIGKVDLTPA-----FFGLLGGQGALPLN 117
            P  +          G   D     A LA    G  D  PA     FFGL G  G LPL+
Sbjct: 53  DPLRL----------GQQADCTFAPATLASVDPGG-DGKPARLEQFFFGLGGPNGPLPLH 101

Query: 118 YTEQLINREQLTRDRAAREFFDIFSNRATALFYAAWKKYRLPFHYELDRDGRYLPLLLSL 177
            TE +  R++   D  +++F D+F +R  +LFY AW + R    ++   D  +   L +L
Sbjct: 102 ITEYVRERQRNNADSTSKQFLDVFHHRLLSLFYRAWAEARPTVSHDRPDDDYWSARLAAL 161

Query: 178 AGVSDADTRASLQRGKGALFDEAI---------AGHALAARHRPVSAAYLQRNLSEYFNV 228
           +G           RG  +L ++ +         +GH  A    P     L+  L EYF +
Sbjct: 162 SG-----------RGMPSLLNQGLIPDTAKLHYSGHLSAQTRYPDG---LKAILGEYFGL 207

Query: 229 PVHVEQFVGKWYDVP-RDQLTVLGSVNATLGATALAGTRVWQRDLRVRLLIGPLKKADYE 287
           PV +E++VG+W ++P R +++V  +    LG     G+ VW R  + R+ +GPL   DY 
Sbjct: 208 PVEIEEYVGQWLELPERSRVSVSAN---RLGVDFCLGSFVWDRQHKFRIRLGPLTLEDYM 264

Query: 288 AFLPGAERAIALERMLTLLAGVTLEYEVKLILRHEDVGPSILGKGSRLGWDAFL 341
             LPG +    L   +    G  L++++ L+L+  +V    L    RLG++ +L
Sbjct: 265 GMLPGQQPFNELVAWVAEYLGHELDWDLNLVLQQPEVPALQLNGQFRLGFNTWL 318