Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Paraburkholderia sabiae LMG 24235

Subject, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 85/349 (24%), Positives = 143/349 (40%), Gaps = 28/349 (8%)

Query: 1   MQTAQRRIDPGVVEQLLDEPHRFEFFQAVRLLEKWFGQEASQRPGDVVAQ-RMTFRTTLS 59
           M    R+    + ++LL   H++ FFQ +  L    G +   R  D   + R+   +   
Sbjct: 1   MAHPDRQATADLADKLLANAHQYNFFQLLERLHGLHGDDLEPRWADEATRLRVRLASDPR 60

Query: 60  LAFPPSEIQGAVSYDEEGGALNDKAQRTAALADDAIGKVDLTPAFFGLLGGQGALPLNYT 119
           L FP S++               KA+R     +D   +V  T  F GL G    LP  Y 
Sbjct: 61  LTFPVSDVY--------------KAERMPG--EDERYRVCTT--FMGLHGTDSPLPTYYL 102

Query: 120 EQLINREQLTRDRAAREFFDIFSNRATALFYAAWKKYRLPFHYELDRDGRYLPLLLSLAG 179
           EQ +  E          FFD F++   +L +  W+KYR    ++      +   + +L G
Sbjct: 103 EQ-VAYEHAQGVGVRPAFFDFFNHYLLSLLHRIWRKYRYYIRFQPGARDGFSQYMFALLG 161

Query: 180 VSDADTRASLQRGKGALFDEAIAGHALAARHRPVSAAYLQRNLSEYFNVP-VHVEQFVGK 238
           ++D   R         L   + AG   +    P + A +   ++  F++  V + +F  +
Sbjct: 162 LNDKQLRGDTTLPWSRLL--SFAGVIASRGRAPGTVAGI---IAHCFDLTHVQIREFETR 216

Query: 239 WYDVPRDQLTVLGSVNATLGATALAGTRVWQRDLRVRLLIGPLKKADYEAFLPGAERAIA 298
                  QL  LG  N  LG+T + G+R   R  +  +LI  L +A     LP       
Sbjct: 217 TVTTNSKQLVSLGRSNGELGSTFMVGSRTRTRSSKFTILISELDQAQLHDLLPSGINFGR 276

Query: 299 LERMLTLLAGVTLEYEVKLILRHEDVGPSIL--GKGSRLGWDAFLCTHE 345
           L  ++  L    L Y+++L L+   + P  L   +G+ LGW +F+  H+
Sbjct: 277 LRALIDFLLRDGLAYDLELRLKQNALSPFYLHRSQGAYLGWTSFVDDHD 325