Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Paraburkholderia sabiae LMG 24235

Subject, 356 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  198 bits (504), Expect = 2e-55
 Identities = 129/349 (36%), Positives = 185/349 (53%), Gaps = 25/349 (7%)

Query: 1   MQTAQRRIDPGVVEQLLDEPHRFEFFQAVRLLEKWFGQ----EASQRPGDVVAQRMTFRT 56
           M +  RR  PG+++Q   EPHRFEFFQ VRLL   + +    + + RP +     + FRT
Sbjct: 1   MASTHRRSAPGLIDQARAEPHRFEFFQLVRLLRLHYSRTGRMDLATRPHE---DPLRFRT 57

Query: 57  TLSLAFPPSEIQGAVSYDEEGGALNDKAQRTAALADDAIGKVDLTPAFFGLLGGQGALPL 116
            LSLAFP SE+   + ++ EG           + A   + +V +T  F GL+G  G LP 
Sbjct: 58  QLSLAFPASEVSD-LHFEREG---------KVSPAGLPLSEVQVT--FMGLVGPSGVLPR 105

Query: 117 NYTEQLINREQLTRDRAAREFFDIFSNRATALFYAAWKKYRLPFHYELDRDGR--YLPLL 174
            YTE L+ R    RD AA  F DIFS+R T LFY AW+KY+  FH E +R+G   +   L
Sbjct: 106 PYTELLLERHVQYRDDAAHAFLDIFSHRMTTLFYEAWQKYK--FHIEHERNGTSGFDGYL 163

Query: 175 LSLAGVSDADTRASLQRGKGALFDEAIAGHALAARHRPVSAAYLQRNLSEYFNVPVHVEQ 234
           L+L G+     +   +    AL  E  +  A     +P +A  L+R L  YF++P+ V+ 
Sbjct: 164 LNLVGLGPRAQKLKFEEQPSALRRELFSYFAGLLSQKPRNALNLERMLGFYFSLPIKVQP 223

Query: 235 FVGKWYDVPRDQLTVLGSVNATLGATALAGTRVWQRDLRVRLLIGPLKKADYEAFLPGAE 294
           F G+W  +  +Q T LG  NA LG +A+AG RVW     +R+ +GPL  ADY+ F PG  
Sbjct: 224 FAGRWLHLQPEQCTQLGRRNAQLGHSAVAGNRVWDYQSCIRIELGPLSLADYQRFQPGTA 283

Query: 295 RAIALERMLTLLAGVTLEYEVKLILRHEDVGPSILGKGSR--LGWDAFL 341
               L  ++    G  L++E+   L+ E V  + LG+     LGW  +L
Sbjct: 284 CYRKLVELVRFYIGAELDFEIAPRLKREAVPRAQLGRSGNVALGWLGWL 332