Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Paraburkholderia sabiae LMG 24235

Subject, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 28/345 (8%)

Query: 1   MQTAQRRIDPGVVEQLLDEPHRFEFFQAVRLLEKWFGQEASQR-PGDVVAQRMTFRTTLS 59
           M    R+    + ++LL E H++ FFQ +  L    G +   R P     +R+       
Sbjct: 1   MANTDRQATADLADKLLCEAHQYNFFQLLERLHGLHGDDLEPRWPDKATRRRVRLACDPR 60

Query: 60  LAFPPSEIQGAVSYDEEGGALNDKAQRTAALADDAIGKVDLTPAFFGLLGGQGALPLNYT 119
           L FP S++               KAQR  A  ++A  ++  T  F GL G    LP  Y 
Sbjct: 61  LTFPVSDVY--------------KAQRMPA--EEARYRIIAT--FLGLHGTDSPLPTYYL 102

Query: 120 EQLINREQLTRDRAAREFFDIFSNRATALFYAAWKKYRLPFHYELDRDGRYLPLLLSLAG 179
           EQ +  E          FFD F++   +L +  W+KYR    ++      +   + +L G
Sbjct: 103 EQ-VAYEHAHGIGVRPAFFDFFNHYLLSLLHRIWRKYRYYIRFQPGASDGFSQYVFALLG 161

Query: 180 VSDADTRASLQRGKGALFDEAIAGHALAARHRPVSAAYLQRNLSEYFNV-PVHVEQFVGK 238
           ++D   R         L   + AG   +    P + A +   ++  F++  VH+ +F  +
Sbjct: 162 LNDKQLRGDTALPWSRLL--SFAGVIASRSRAPGTVAGI---IAHCFDLKQVHIREFETR 216

Query: 239 WYDVPRDQLTVLGSVNATLGATALAGTRVWQRDLRVRLLIGPLKKADYEAFLPGAERAIA 298
               P  QL  LG  N  LG+T + G+R   R  +  ++I  L +      LP       
Sbjct: 217 SVVTPSRQLASLGRTNGQLGSTFMIGSRTRTRSSKFTIVISELDQTQLRDLLPSGINFGR 276

Query: 299 LERMLTLLAGVTLEYEVKLILRHEDVGPSIL--GKGSRLGWDAFL 341
           L  ++  L    L Y+++L L+   + P  L   +G+ LGW +F+
Sbjct: 277 LRALIDFLLRDGLAYDLELRLKQSALSPFCLHRSQGAYLGWTSFV 321