Pairwise Alignments

Query, 361 a.a., type VI secretion system baseplate subunit TssG from Paraburkholderia sabiae LMG 24235

Subject, 334 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  116 bits (291), Expect = 7e-31
 Identities = 89/266 (33%), Positives = 135/266 (50%), Gaps = 15/266 (5%)

Query: 96  GKVDLTPAFFGLLGGQGALPLNYTEQLINREQLTRDRAAREFFDIFSNRATALFYAAWKK 155
           G  +L  AF  ++G  G+LP  Y E L+ RE+  R  A   FF++F+ R + LF AA +K
Sbjct: 64  GHAELKSAFAPIVGPLGSLPPAYGE-LLQREERNRSAALASFFNLFAARFSELFVAATEK 122

Query: 156 YRLPFHYEL---DRDGRYLPLLLSLAGVSDADTRASLQRGKGALFDEAIA-GHALAARHR 211
           YRL         ++D  +   LL+L G         L +  G   D  +     LA+R+R
Sbjct: 123 YRLARGLRWSAREQDNGFRKTLLALTGFRTT----GLAQKAGVAEDTLLRFSGLLASRNR 178

Query: 212 PVSAAYLQRNLSEYFNVPVHVEQFVGKWYDVPRDQLTVLGSVNAT-LGATALAGTRVWQR 270
            VSA  L   L E+  +PV VEQF  +W  +P  + + LG  +   LG    AG+ V   
Sbjct: 179 NVSA--LTSMLCEFTALPVTVEQFRRRWVALPLHEQSQLGQASGLRLGQNTTAGSAVEDM 236

Query: 271 DLRVRLLIGPLKKADYEAFLPGAERAIALERMLTLLAGVTLEYEVKLILRHEDVGPSILG 330
               R++IGP+  ADY A  PG++R   +  +  L  G  L ++V++IL+ ED+    LG
Sbjct: 237 SGGFRVVIGPVGYADYLALTPGSKRLAEIFALTRLFVGSALHFDVQVILKKEDIPFCRLG 296

Query: 331 KG---SRLGWDAFLCTHEVREDRADA 353
           +    +RLGW+++       +D ADA
Sbjct: 297 QSDAPARLGWNSWARVAPAEKDSADA 322