Pairwise Alignments

Query, 594 a.a., flagellar basal-body MS-ring/collar protein FliF from Paraburkholderia sabiae LMG 24235

Subject, 592 a.a., flagellar M-ring protein FliF from Pseudomonas simiae WCS417

 Score =  325 bits (833), Expect = 3e-93
 Identities = 211/578 (36%), Positives = 316/578 (54%), Gaps = 55/578 (9%)

Query: 54  SLTQMRGNPRAPLIFAVAVLIAVVAGLILWSRAPDYKVLYSNVSDQDGGAIVAALQQANV 113
           +L++M    +  L+  +A  +A+   ++LWS+ PDY+ LY +++  D   I+  L  A++
Sbjct: 27  NLSEMTMLRQVGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMETLAAADI 86

Query: 114 PYKFSDAGGAILIPADQVHEMRLRLASQGL-PKSGSVGFELMD-NQKFGISQFAEQINYQ 171
            Y      GA+L+ AD V   R++LA+ G+ P   ++GFE++D +Q  G SQF E   Y+
Sbjct: 87  AYTVEPNSGALLVKADDVARARMKLAAAGVTPSDSNIGFEILDKDQGLGTSQFMEATRYR 146

Query: 172 RALEGELQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVA 231
           R LEGEL RTI S++ VK ARVHLAIPK +VFVRD   PSASVLV L+ GR L+ GQV+A
Sbjct: 147 RGLEGELARTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELFAGRSLEPGQVLA 206

Query: 232 ITHMVASAVPDMPVRGVTIVDQDGNLLTQAGANGAGLDA-TQLKYVQQIERNTQQRIDAI 290
           I ++VA++VP++    +T+VDQ GNLL+    N A   A  Q  Y +++E    QR+  I
Sbjct: 207 IVNLVATSVPELSKSQITVVDQKGNLLSDQAENSALTQAGKQFDYSRRVESMLTQRVHNI 266

Query: 291 LGPMFGSGNAHSSVSADIDFSKNEQTSERYAPNNDPQQASIRSQQTSTATEMSQSG-ASG 349
           L P+ G+    + VSAD+DFS  E TSE++    +P Q ++RS+Q+++    + +G   G
Sbjct: 267 LQPVLGNDRYKAEVSADVDFSAVESTSEQF----NPDQPALRSEQSTSEQRTAANGPPQG 322

Query: 350 VPGALSNQPPQPASAPITAS--------------------------ANGASGVTTTPVSD 383
           VPGALSNQPP PASAP T                            A G   +   P   
Sbjct: 323 VPGALSNQPPAPASAPQTTGGATASAGAIQPGQPLLDANGQQIMDPATGQPMLAPYPADK 382

Query: 384 HKDSTTNYELSKTVSHTEQAVGGIKRLSVAVVV-NYMRVVDAKGHATMQPISADKLAQVD 442
              ST N+EL +++SHT+Q  G + RLSV+VVV + ++V  A G  T  P SAD+LA+  
Sbjct: 383 RNQSTKNFELDRSISHTKQQQGRVNRLSVSVVVDDQVKVNAADGAVTRAPWSADELARFT 442

Query: 443 QLVKEAMGYSQARGDTVKVISSAF-----QQIADPD-ADLPWWRTKDMIAMYKQIATYAG 496
           +LV++A+G+  +RGD+V VI+  F     + IA+P     PW+        +  +    G
Sbjct: 443 RLVQDAVGFDASRGDSVSVINMPFSAERGEVIAEPAFYSQPWF--------WDIVKQVLG 494

Query: 497 IGLVALFLYFVMVKPALRRAFPPPPEVVAALPSPDEPVLDGLPSAAAVAAEEEVE---GS 553
           + L  L L F +++P L        + +A      E  L G+       A + V      
Sbjct: 495 V-LFILVLVFGVLRPVLNNITGNGKKQLALAGGDVE--LGGMGGLDGELANDRVSLGGPQ 551

Query: 554 LVSLESDKAKYERNLEYARQIARQDPKIVATVVKSWVS 591
            + L S    Y+  L   + +  +DP  VA VVK W++
Sbjct: 552 SILLPSPSEGYDAQLNAIKSLVAEDPGRVAQVVKEWIN 589