Pairwise Alignments

Query, 594 a.a., flagellar basal-body MS-ring/collar protein FliF from Paraburkholderia sabiae LMG 24235

Subject, 592 a.a., Flagellar M-ring protein from Pseudomonas putida KT2440

 Score =  332 bits (850), Expect = 3e-95
 Identities = 214/573 (37%), Positives = 318/573 (55%), Gaps = 48/573 (8%)

Query: 54  SLTQMRGNPRAPLIFAVAVLIAVVAGLILWSRAPDYKVLYSNVSDQDGGAIVAALQQANV 113
           +++QM    +  L+  +A  +A+   ++LWS+ PDY+ LY ++S  D   ++  L  A++
Sbjct: 30  NISQMPMLRQIGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLSGMDTKQVMDTLAAADI 89

Query: 114 PYKFSDAGGAILIPADQVHEMRLRLASQGL-PKSGSVGFELMDNQK-FGISQFAEQINYQ 171
           PY      GA+L+ AD +   RL+LA+ G+ P  G+VGFEL+D ++  G SQF E   Y+
Sbjct: 90  PYNVEPNSGALLVKADDLSRARLKLAAAGVAPSDGNVGFELLDKEQGLGTSQFMEATRYR 149

Query: 172 RALEGELQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVA 231
           R+LEGEL RT+ S++ VK ARVHLAIPK +VFVRD   PSASVLV LYPGR L+ GQV+A
Sbjct: 150 RSLEGELARTVSSLNNVKAARVHLAIPKSSVFVRDERKPSASVLVELYPGRALEAGQVMA 209

Query: 232 ITHMVASAVPDMPVRGVTIVDQDGNLLTQAGANGAGLDA-TQLKYVQQIERNTQQRIDAI 290
           I ++VA++VP++    VT+VDQ GNLL++   + A   A  Q  Y +++E    QR+  I
Sbjct: 210 IVNLVATSVPELDKSQVTVVDQKGNLLSEQIQDSALTQAGKQFDYSRRVESMLTQRVHNI 269

Query: 291 LGPMFGSGNAHSSVSADIDFSKNEQTSERYAPNNDPQQASIRSQQTSTATEMSQSGASGV 350
           L P+ G+    + VSAD+DFS  E TSE++    +P Q ++RS+Q+      S  G  GV
Sbjct: 270 LQPVLGNDRYKAEVSADLDFSAVESTSEQF----NPDQPALRSEQSVDEQRASSQGPQGV 325

Query: 351 PGALSNQPPQPASAPITAS--------------------------ANGASGVTTTPVSDH 384
           PGALSNQPP  ASAP T                            A G   +   P    
Sbjct: 326 PGALSNQPPGAASAPQTTGGAATPAAAIQPGQPLVDANGQQIMDPATGQPMLAPYPSDKR 385

Query: 385 KDSTTNYELSKTVSHTEQAVGGIKRLSVAVVV-NYMRVVDAKGHATMQPISADKLAQVDQ 443
           + ST N+EL +++SHT Q  G + RLSVAVVV + +++  A G  T  P  A+ LA+  +
Sbjct: 386 QQSTKNFELDRSISHTRQQQGRMARLSVAVVVDDQVKIDPATGDTTRAPWGAEDLARFTR 445

Query: 444 LVKEAMGYSQARGDTVKVISSAF-QQIADPDADLPWWRTKDMIAMYKQIATYAGIGLV-A 501
           LV++A+G+  +RGD+V VI+  F     +  AD+ +++      + KQ+     +G+V  
Sbjct: 446 LVQDAVGFDASRGDSVTVINVPFAADRGEEIADIAFYQQPWFWDIVKQV-----LGVVFI 500

Query: 502 LFLYFVMVKPALRRAFPPPPEVVAALPSPDEPVLDGLPSAAAVAAEEEVE---GSLVSLE 558
           L L F +++P L        +   A P  D   L G+       A + V     + + L 
Sbjct: 501 LVLVFGVLRPVLNNITGGGKQ---AAPDSDME-LGGMMGLDGELANDRVSLGGPTSILLP 556

Query: 559 SDKAKYERNLEYARQIARQDPKIVATVVKSWVS 591
           S    YE  L   + +  +DP  VA VVK W++
Sbjct: 557 SPSEGYEAQLNAIKGLVAEDPGRVAQVVKDWIN 589