Pairwise Alignments

Query, 594 a.a., flagellar basal-body MS-ring/collar protein FliF from Paraburkholderia sabiae LMG 24235

Subject, 566 a.a., flagellar M-ring protein from Agrobacterium fabrum C58

 Score =  176 bits (447), Expect = 2e-48
 Identities = 131/425 (30%), Positives = 199/425 (46%), Gaps = 22/425 (5%)

Query: 60  GNPRAPLIFAVAVL-IAVVAGLILWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFS 118
           G  R  ++  V VL +A++    L+   P Y+ LY  +   D   I  AL ++ + ++  
Sbjct: 24  GQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDFQVG 83

Query: 119 DAGGAILIPADQVHEMRLRLASQGLPKSGSVGFELMDN-QKFGISQFAEQINYQRALEGE 177
             G ++ +P     + RL LA +GLP S + G+EL DN    G++ F +++   RALEGE
Sbjct: 84  TDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGE 143

Query: 178 LQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLV--NLYPGRMLDEGQVVAITHM 235
           + R+I+ I  V  ARVH+ +P    F R  + P+ASV++  +   GR        +I H+
Sbjct: 144 IGRSIQQIDGVSAARVHIVLPDVGNFRRGEQKPTASVMIRASASAGRKAS----ASIRHL 199

Query: 236 VASAVPDMPVRGVTIVDQDGNLLTQAGANGAGLDATQLKYVQQIERNTQQRIDAILGPMF 295
           VASAVP + V  VT++D  G LL              L   Q +++     ID  L P  
Sbjct: 200 VASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLAQNVQQEITTNIDKALAPFL 259

Query: 296 GSGNAHSSVSADIDFSKNEQTSERYAPNNDPQQASIRSQQTSTATEMSQSGASGVPGALS 355
           G  N  SSV+A I+    +     Y    DP+    RS +T    + SQ         + 
Sbjct: 260 GIDNFRSSVTAQINTDSRQVQETVY----DPESRVERSVRTVKEDQKSQETQPDTAATVE 315

Query: 356 NQPPQPASAPITASANGASGVTTTPVSDHKDSTTNYEL-SKTVSHTEQAVGGIKRLSVAV 414
              PQ       A   G  G  ++  S  K+  TNYE+ SKTV+  +     ++++SVAV
Sbjct: 316 QNVPQ------AAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGY-TLEKISVAV 368

Query: 415 VVNYMRVVDAKGHATMQPISADKLAQVDQLVKEAMGYSQARGDTVKVISSAF--QQIADP 472
           VVN  R+    G    Q      LA++ ++V  A G S  RGD V + +  F   Q+ D 
Sbjct: 369 VVNKGRIAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDFLETQLLDE 428

Query: 473 DADLP 477
            A  P
Sbjct: 429 AASGP 433