Pairwise Alignments

Query, 632 a.a., TRAP transporter large permease subunit from Paraburkholderia sabiae LMG 24235

Subject, 430 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  191 bits (484), Expect = 7e-53
 Identities = 119/407 (29%), Positives = 216/407 (53%), Gaps = 8/407 (1%)

Query: 228 GVPICFSFALATFGYLSLTTDTPLEVIVGRMDEGMSHLVLLAVPLFVFLGLMIEMTGMAR 287
           GVP+ FS  LA+   + L    P+ ++  +M  GM     +A+P FVF G ++   G+A 
Sbjct: 17  GVPVAFSIGLASVATV-LYAGVPVPIVFQKMVGGMQVFSFMAIPFFVFAGELMLYGGIAD 75

Query: 288 AMIQFLASLVGHVRGGLSYVLIGTMYLVSGISGSKVADMAAIAPVLFPEMKRRGADEGDL 347
            +++F  SLVGHVRGGL    +    L  G++GS +AD++A+  V+ P MK+ G D    
Sbjct: 76  RIVRFANSLVGHVRGGLGMSNVVGCTLFGGVAGSALADVSAMGSVMIPLMKKEGYDADYA 135

Query: 348 VALLSTAGAQTETVPPS--IVLITIGS--VTGLSISALFTAGMLPALVLAVM-LCFVVWL 402
           V + + A      +P S  +++ T+ +  +  +S+  L  A ++PA++L V  L    ++
Sbjct: 136 VNVTTHAALVGVLMPTSHNLIIFTLATTGIASVSVLNLILAAIVPAVLLTVCNLAAAYYV 195

Query: 403 RYRKEDLSHAQRFNRREIGRMFIVALPALALPFVIRGAVVEGVATATEVSTIGIAYSVLI 462
             ++   +  +     E+   ++ ALP L +  +I   ++ GV TA E +   + +++++
Sbjct: 196 AVKRGYPTRGKFPGWGEVLSAWLGALPGLLIVVIILVGILSGVFTAAESAATAVLWALVV 255

Query: 463 GLFVYRRFEWSRLPRMLVDAATLSGAIIFIIGCATAMAWALTQSGFSQDLAALMTSLPGG 522
            + VYR   W    +    A+  +G ++ +IG ++A  + +      Q    LMTS+   
Sbjct: 256 TVLVYRSLSWKDFLKACAKASKTTGVVLLLIGISSAFGYFMALYEVPQKTGELMTSVSDN 315

Query: 523 SWA-FLALSIVVFIVLGSVLEGIPAIVLFGPLLFPIARAAGVNEVHYAIVVILSMGVGLF 581
            W  FL ++I++FI LG+ L+    I++  P+  PIA   G++   + IV++++  +GL 
Sbjct: 316 PWVIFLMINILLFI-LGTFLDMAATILVCTPIFLPIAMHFGMDPAQFGIVMLINCALGLN 374

Query: 582 SPPFGVGYYSACAVSRINPDAGMRPIIGYMSALVLGLILVAFVPWIS 628
           +PP GV  +  CA+  I+    MR I+ +  AL + L+LV +VP  S
Sbjct: 375 TPPVGVTQFVGCAIGGISVGQVMRSILPFYGALTVCLMLVTYVPAFS 421