Pairwise Alignments

Query, 502 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

Subject, 503 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  278 bits (712), Expect = 2e-79
 Identities = 170/487 (34%), Positives = 249/487 (51%), Gaps = 5/487 (1%)

Query: 7   MRRRASGALKVGVSVMFAAVLSACVNYAGIHSDAKTAEPQQYATQQSIP--AEQGHWPAA 64
           M RR S  LK       +  +S C+   GI    ++      AT  +I   A+  HWP  
Sbjct: 1   MPRRISRELKTLSVWALSLAISGCIGTGGIAPQGQSLNANTLATDDAIQNAAQDAHWPTG 60

Query: 65  NWADQFGDAQLKTLIDEALKGSPTLEQARARVASAAAFSETAKASTMPRVDASYSLTRQQ 124
            W   +GD QL   +D A + SP++  A ARV  A A +  A+++   ++++  +L R  
Sbjct: 61  QWWQAYGDPQLNRWVDLATQHSPSMAMAAARVREARAMAGVAESAESLQINSDTTLKRHN 120

Query: 125 YSSTALVPP-PYGGSWQTENKGLLSASYDLDLWGKNREALKAAISQLQASQADAEVIKLT 183
           +       P    G+   +N   L  SY LDLWG+   A + A+     S A+A   +L 
Sbjct: 121 WPKDQFYGPGELSGANTWDNNASLGLSYALDLWGRESNATERAVDLAHMSAAEARQAQLE 180

Query: 184 LTTSIARTYNQLARLYALRDIAQQEIAQREQIDRITAGRIATGLDTEVERKTAQANLATS 243
           L  ++ R Y QL+  YA RDI    +AQ++QI  +   R+  G+ T  +   A+  L  +
Sbjct: 181 LQNNVVRAYIQLSLHYANRDIVAATLAQQQQILDLANTRLNAGIGTHFDVSQAETPLPET 240

Query: 244 RATLKSLDGQILTTRYQIAALLGAGPDRGLQIARPTLGIGDEVKLPDNLPADLVSRRPDI 303
              L +LD +I  +R Q+AAL G GP  G Q+ RP+L +   +KLP +LPA L+ +RPD+
Sbjct: 241 HRQLDALDEEIALSRNQLAALAGKGPGEGAQLQRPSLSLAAPLKLPSSLPAQLLGQRPDV 300

Query: 304 VAARWRVDAMTHDVKEAKAEFYPDINLSAAIGLDAFGFG--RFLTAASRTASAGPAIHLP 361
           VA RW+V A    +  A A FYP+++L  ++G  A G G   FL       + GPAI LP
Sbjct: 301 VARRWQVAAQARGIDVAHAGFYPNVDLVGSLGYMATGGGMLEFLAGKKFNYNVGPAITLP 360

Query: 362 IFDAGELRAQLKGRYADFDYAVATYNQTLVTALSEVATQLAGVRSTDGQLVDAQTAQDAA 421
           IFD G LRA+L    A +D AVA YNQTLV AL  ++ QL    S D Q   A  +  +A
Sbjct: 361 IFDGGRLRAELGEASAGYDIAVAQYNQTLVNALKGISDQLIRRESMDKQAAFAAQSVASA 420

Query: 422 RQADTLALVQYKAGLTNQLTVLNADVNALAADQAVANLRMDRRDQQIALASALGGGFVDT 481
           ++   +A++ Y+ GLT+ L VLNA        Q    ++  R      L +ALGGG    
Sbjct: 421 QKTYDIAMIAYQRGLTDYLNVLNAQTLLFHQQQIEQQVQAARLSAHAELVTALGGGLGAG 480

Query: 482 SNTDQNA 488
            +  Q+A
Sbjct: 481 DDAPQDA 487