Pairwise Alignments

Query, 436 a.a., O-antigen ligase family protein from Paraburkholderia sabiae LMG 24235

Subject, 460 a.a., O-antigen polymerase from Pseudomonas simiae WCS417

 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 50/291 (17%)

Query: 133 DSFGSFFIARNAAGGFLAMLFCLGVACYLQQRSR------------------IMVALIAL 174
           D+ GS+ + RN   G+L M    G+   L  R +                  + +AL+ +
Sbjct: 166 DATGSY-VNRNHFAGYLEMTLACGIGLLLALRDKRSFSWVNLLQVLMGPKALLRLALVIM 224

Query: 175 NGLMLFSTYSRGSLLGALAVL----PYLYFGRKRLILASLM--SVLVVASLAMASYHTLP 228
              ++ S    G++    ++L     ++ + R+  +  SL+  S++++  L ++ Y  L 
Sbjct: 225 VIALVMSHSRMGNMAFFASLLIVGGVFVMYERRNRLRNSLILCSLIIIDVLVISQYFGLA 284

Query: 229 N-----VNYMGYTFSIQNADAKLANLNIRYEWLWPRALAYFVQSPIVGMGFGSFDDTIRN 283
                 VN   +   + N   + AN  +R + ++  A+   ++ P+ G G G+F+   + 
Sbjct: 285 QLKDRLVNTRLHDVQVNNEVVQSAN-EVRAD-VFGYAIPLLLERPMAGHGAGTFEAVFQQ 342

Query: 284 VTSYFGVLAVPSDIVVEHSDSHAHNSYLNFLAETGVVGLTLLLAF-YWKLIKWSQNGAAR 342
                     P   +  H D HAHN YL  L E G+ G   L  F  + LI+  +    R
Sbjct: 343 C---------PGSNIRLHFD-HAHNDYLQILIEFGLAGSFFLALFVVFALIQAFKALGNR 392

Query: 343 SALVEHGQNFAAYRFVEISSVCLLVMAATEHRLVSPSNV---LILSLVISL 390
            ++   G  FAA     +  + LL+ ++T+  L  P+N    +ILS +  L
Sbjct: 393 QSIFRSGVGFAAC----MGIISLLIHSSTDFNLQIPANATTFVILSAIAVL 439