Pairwise Alignments

Query, 373 a.a., polyamine ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  330 bits (846), Expect = 4e-95
 Identities = 161/366 (43%), Positives = 244/366 (66%), Gaps = 6/366 (1%)

Query: 6   LRHAVAGAALLAAAGITGLSATPAHAADTELNVYNWSDYIAKDTIPNFEKQTGIHVKYDN 65
           +RH  A    L  A  T L AT   AA T ++VYNW+DYI   T+ +F+  +GI V YD 
Sbjct: 1   MRHLQA----LIPAAFTLLFATTTQAAPT-VSVYNWTDYIGDTTLADFQASSGIKVVYDV 55

Query: 66  YDSDDTLQAKLLAGSSGYDIVVPTSNYMAKQIQAGVYQKLDKTQIPNLKNLDPTLMKLIA 125
           +DS++TL+ KLLAG +GYD+VVP+++++A+Q QAG +  LD++++PN ++LDP L+K + 
Sbjct: 56  FDSNETLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLE 115

Query: 126 DADPGNQYGVPWAYGTDGIGYNVQAVQKVLGANAPVDSWSLVFDPANLSKLKSCGVSFLD 185
             DPGNQY VP+ +GT+GIGYNV  V+  LG +  +DSW+++F+P NL KLK CGV+F+D
Sbjct: 116 QNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMD 174

Query: 186 QAVDVFAATLQYMHKDPNSTNPGDYQAAYEVLKKVRPYITQFNSSGYINDLANNDVCVVV 245
              ++F A L Y+  DP S  PGDY  A   L ++RPYIT F+SS Y++DLAN DVC+  
Sbjct: 175 SPDELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAF 234

Query: 246 GWSGDVGIARRRTQEAKRSYEIKFSNVKEGGLLWFDVMVVPKDAPHPEAAMKWINFISDA 305
           G+SGDV  A  R  EAK   ++ +S  KEG  LWFD++ +PKDA +PE A+ +IN++ D 
Sbjct: 235 GYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDP 294

Query: 306 KNNAGITNEVFYPTANRAARQFVTPAVAQDQTVYPADDVIARMTLMKPMPTEILRLENRL 365
           K  A ++  V Y  AN  A+ ++  ++  +  +YP  +V+ ++ +      +I+R+  R 
Sbjct: 295 KVIAKVSATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSPKIMRVMTRS 354

Query: 366 WAQLKT 371
           W+++K+
Sbjct: 355 WSKIKS 360