Pairwise Alignments

Query, 510 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 501 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  430 bits (1105), Expect = e-125
 Identities = 230/493 (46%), Positives = 326/493 (66%), Gaps = 4/493 (0%)

Query: 17  LLRLRGVGKRFPGVVALDGIDLDLRAGEVHAVCGENGAGKSTLMKIISGQYRADEGTVCY 76
           LL+L+G+ K FPGV AL G  L++  G V A+ GENGAGKST+MK+++G Y  D G++ +
Sbjct: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSLLW 63

Query: 77  RGAPVQFASTSEAQAAGIAIIHQELNLVPHLSVAENIYLARE-PKRGPFVDYRTLNANAR 135
            G    F     +Q AGI IIHQELNL+P L++AENI+L RE   R   +D++ + A A 
Sbjct: 64  LGKETTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKKMYAEAD 123

Query: 136 QCLQRIGLNVSPVTLVGALSIAQQQMVEIAKALSLDARVLIMDEPTSSLTESETVQLFRI 195
             L ++ L      LVG LSI  QQMVEIAK LS +++V+IMDEPT +LT++ET  LFR+
Sbjct: 124 HLLAKLNLRFKSDKLVGELSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETDSLFRV 183

Query: 196 IRELRADGVAILYISHRLDEMAEIVDRVTVLRDGRHIATSDFASTSINEIVARMVGRPLD 255
           IREL++ G  I+YISHR+ E+ EI D VTV RDG+ IA  + A+ + + ++  MVGR L+
Sbjct: 184 IRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVATLTEDSLIEMMVGRKLE 243

Query: 256 DAYPPRQSTPTGELLLRVRDLQRTGTFGPVSFELRKGEILGFAGLMGAGRTEVARAIFGA 315
           D YP   + P GE+ L+V +L   G    VSF LRKGEILG +GLMGAGRTE+ + ++GA
Sbjct: 244 DQYPHLDNAP-GEIRLKVDNLCGPGV-NDVSFVLRKGEILGISGLMGAGRTELMKVLYGA 301

Query: 316 DRPDSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANITLANVRAIS- 374
               SG + L    V   SP++ + +GI Y+SEDRK+DGL L M V  N++L  +   S 
Sbjct: 302 MPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALDYFSR 361

Query: 375 SRGFLRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYRGSRILFFDE 434
           + G L+  +E    G ++R   ++TP++ Q    LSGGNQQK+ I++ L    ++L  DE
Sbjct: 362 AGGSLKHKDEQQAVGDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDE 421

Query: 435 PTRGIDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGRITAVLETSQ 494
           PTRG+DVGAK  IY L+++  +DG+ ++L+SSE+PE+LGM+DRI V HEG ++      Q
Sbjct: 422 PTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQ 481

Query: 495 TSQEEILHHASGR 507
            +QE ++  A G+
Sbjct: 482 ATQEVLMAAAVGK 494