Pairwise Alignments

Query, 510 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 499 a.a., hypothetical protein from Escherichia coli BL21

 Score =  474 bits (1220), Expect = e-138
 Identities = 252/494 (51%), Positives = 337/494 (68%), Gaps = 3/494 (0%)

Query: 15  EDLLRLRGVGKRFPGVVALDGIDLDLRAGEVHAVCGENGAGKSTLMKIISGQYRADEGTV 74
           E  L+++ + KRFPGV+AL+ +   LR GEVHA+ GENGAGKSTLMKI+SG Y+ DEG +
Sbjct: 3   ETFLQMKHITKRFPGVLALNDVQFSLRRGEVHALLGENGAGKSTLMKILSGVYQPDEGEI 62

Query: 75  CYRGAPVQFASTSEAQAAGIAIIHQELNLVPHLSVAENIYLARE--PKRGPFVDYRTLNA 132
            +   PV F+    AQ  GI IIHQE NL P L+V ENI++ RE   K    +D +    
Sbjct: 63  IFEDKPVSFSDPLSAQNVGITIIHQEFNLFPELTVEENIFIGREFCKKNRWRLDEKQQRQ 122

Query: 133 NARQCLQRIGLNVSPVTLVGALSIAQQQMVEIAKALSLDARVLIMDEPTSSLTESETVQL 192
              + LQ++ L + P TLV  L++AQQQMVEIAKA+S++AR+LIMDEPT++LTE+E   L
Sbjct: 123 ATIEILQKLNLAIKPDTLVADLTVAQQQMVEIAKAISVNARILIMDEPTAALTETEIESL 182

Query: 193 FRIIRELRADGVAILYISHRLDEMAEIVDRVTVLRDGRHIATSDFASTSINEIVARMVGR 252
           FR+ R L+  G  I+YISHRL+E+A I DR TV+RDG++I+T D+    I++++A MVGR
Sbjct: 183 FRVTRLLKEQGTGIVYISHRLEELALIADRATVMRDGQYISTVDYECVKISDLIAMMVGR 242

Query: 253 PLDDAYPPRQSTPTGELLLRVRDLQRTGTFGPVSFELRKGEILGFAGLMGAGRTEVARAI 312
            L + YP R++      +L V  L R G    ++F L +GEILGFAGLMGAGRTE+ARAI
Sbjct: 243 DLGNIYPRREALQQRIPVLEVNGLTRKGVLNDINFTLYRGEILGFAGLMGAGRTELARAI 302

Query: 313 FGADRPDSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANITLANVRA 372
           FGAD  DSG++ L      I    +AI+ GI+YL+EDRKK+GLAL++ V  NI L N   
Sbjct: 303 FGADSIDSGTLKLNGKETVIKDISDAIQQGISYLTEDRKKEGLALNLSVERNIMLGNYPE 362

Query: 373 ISSR-GFLRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYRGSRILF 431
            S R G +        +   V+ L I+TP + Q A NLSGGNQQKI+I++W+ + + IL 
Sbjct: 363 YSDRFGNVDSRRCQQTSEEQVKALRIKTPNLEQAALNLSGGNQQKIIIARWVCKDTDILI 422

Query: 432 FDEPTRGIDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGRITAVLE 491
           FDEPTRGIDVGAK  IY LM+RL + G  +++ISSELPE+LGM DRI V   GRIT  L 
Sbjct: 423 FDEPTRGIDVGAKLEIYELMNRLVAKGKSIIMISSELPEVLGMCDRILVMRSGRITGELS 482

Query: 492 TSQTSQEEILHHAS 505
             + +QE+I+ +A+
Sbjct: 483 AKEATQEKIMQYAT 496



 Score = 82.0 bits (201), Expect = 4e-20
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 4/223 (1%)

Query: 285 VSFELRKGEILGFAGLMGAGRTEVARAIFGADRPDSGSILLGDTPVSIGSPREAIRHGIA 344
           V F LR+GE+    G  GAG++ + + + G  +PD G I+  D PVS   P  A   GI 
Sbjct: 24  VQFSLRRGEVHALLGENGAGKSTLMKILSGVYQPDEGEIIFEDKPVSFSDPLSAQNVGIT 83

Query: 345 YLSEDRKKDGLALSMPVSANITLANVRAISSRGFLRFSEEAAVAGRYVRELGIRTPTVRQ 404
            + ++     L   + V  NI +       +R  L   ++       +++L +       
Sbjct: 84  IIHQEFN---LFPELTVEENIFIGREFCKKNRWRLDEKQQRQATIEILQKLNLAIKPDTL 140

Query: 405 IAKNLSGGNQQKIVISKWLYRGSRILFFDEPTRGIDVGAKYAIYGLMDRLASDGVGVVLI 464
           +A +L+   QQ + I+K +   +RIL  DEPT  +      +++ +   L   G G+V I
Sbjct: 141 VA-DLTVAQQQMVEIAKAISVNARILIMDEPTAALTETEIESLFRVTRLLKEQGTGIVYI 199

Query: 465 SSELPELLGMTDRIAVFHEGRITAVLETSQTSQEEILHHASGR 507
           S  L EL  + DR  V  +G+  + ++       +++    GR
Sbjct: 200 SHRLEELALIADRATVMRDGQYISTVDYECVKISDLIAMMVGR 242